Anguilla japonica antibacterial peptide Cathelicidin1 gene promoter and application thereof
A promoter, antimicrobial peptide technology, applied in the field of genetic engineering, can solve problems such as missing transcription binding sites
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Embodiment 1
[0040] Example 1 Cloning of the Japanese eel antimicrobial peptide Cathelicidin1 gene promoter
[0041] 1. Using the TaKaRa MiniBEST Universal Genomic DNA Extraction Kit Ver.5.0 Kit to extract and purify the genomic DNA from the Japanese eel muscle tissue. The specific operation is as follows:
[0042] 1. Take 10 mg of Japanese eel muscle tissue and mince it with a blade, put it in a 2ml centrifuge tube, add 180 μL of Buffer GL, 20 μL of Proteinase K and 10 μL of RNase A (10 mg / mL), and warm it in a water bath at 56 ° C overnight for lysing.
[0043] 2. Add 200 μL Buffer GB and 200 μL 100% ethanol to the lysate, and mix well by pipetting. Place the SpinColumn on the Collection Tube, transfer the solution to the Spin Column, centrifuge at 12,000rpm for 2 minutes, and discard the filtrate.
[0044] 3. Add 500 μL of Buffer WA to the Spin Column, centrifuge at 12,000 rpm for 1 minute, and discard the filtrate.
[0045] 4. Add 700 μL of Buffer WB (100% ethanol with a specified v...
Embodiment 2
[0057]Example 2 Prediction of the transcription factor binding site of the Japanese eel antimicrobial peptide Cathelicidin1 gene promoter
[0058] Log in to the online prediction software Alibaba2 (http: / / gene-regulation, com / pub / programs / alibaba2 / index.html) for the binding sites of transcription factors in the 5′ flanking region of the gene, and activate the antimicrobial peptide Cathelicidin1 gene that has been verified by cloning tests After copying the subsequence, paste it in the dialog box in fasta format, and click START to perform the prediction analysis of transcription factor binding sites. The result is as figure 1 Shown:
[0059] The main transcription factor binding sites of the Japanese eel antimicrobial peptide Cathelicidin1 gene promoter are as follows:
[0060]
Embodiment 3
[0061] Example 3 Analysis of the activity of the Japanese eel antimicrobial peptide Cathelicidin1 gene promoter
[0062] 1. Construction of the recombinant luciferase reporter gene vector pGL3-Cathelicidin1-pro containing the promoter fragment of the Japanese eel antimicrobial peptide Cathelicidin1 gene.
[0063] The Japanese eel antimicrobial peptide Cathelicidin1 gene promoter fragment was inserted into the luciferase reporter gene vector pGL3-Basic of Promega Company, so that the expression of the firefly luciferase (Luciferase) reporter gene was controlled by the Japanese eel antimicrobial peptide Cathelicidin1 gene promoter, and the obtained The recombinant vector was named pGL3-Cathelicidin1-pro. Specific steps are as follows:
[0064] Synthesize an upstream primer with a SacI restriction site:
[0065] 5'-CGAGCTCCAGTTATTTTGGCAGAGCCTTGTAGA-3' (as shown in SEQ ID NO: 5),
[0066] Downstream primers with Hind III restriction sites:
[0067] 5'-CCCAAGCTTAGTTTCAGCATGAGGG...
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