Specific primer pair for rapid identification of alien invasive Pomacea in China based on multiple PCR (Polymerase Chain Reaction) and application of specific primer pair
A specific primer pair and apple snail technology, applied in the biological field, can solve the problems of variation, uncertainty, and difficulty in identification of snail species, and achieve the effects of short time-consuming, high detection sensitivity, and easy operation
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Embodiment 1
[0025] Embodiment 1: the design of multiplex PCR specific primer pair
[0026] The present invention designs specific primer pairs for the two invasive apple snails, as shown in Table 1, on the basis of obtaining the DNA barcode segments of the mitochondrial COI gene DNA segments of two kinds of invasive apple snails.
[0027] Based on the common apple snail mitochondrial cytochrome oxidase subunit I barcode (mtDNACOIbarcode) segment, a multiplex PCR-specific primer pair that can identify two invasive apple snails was designed and synthesized:
[0028] PomF (sequence 1 of the sequence listing): 5'-GTTTACTTATTCGTGCTGAGTTAGG-3'; Tm=55.6°C, GC%=40%;
[0029] PcanR (sequence 2 of the sequence listing): 5'-GCAAGAACCGGCAATGATAAGAGCA-3'; Tm=64.1°C, GC%=48%.
[0030] PmacR (sequence 3 of the sequence listing): 5'-AGCTAAAGGAGGGTACACTGTTCAC-3'; Tm=60.3°C, GC%=48%.
Embodiment 2
[0031] Example 2: Application of specific primers to detect two invasive apple snails
[0032] Adopt following sample in the embodiment:
[0033] Sample 1-2: Apple snails collected from population 1 of Putuo Island, Zhoushan, Zhejiang P. canaliculata Egg grains of different egg masses; samples 3-4: apple snails collected from population 2 of Putuo Island, Zhoushan, Zhejiang P. canaliculata Eggs of different egg masses; samples 5-6: apple snails collected from Jieyang Airport District, Guangdong P. canaliculata Eggs of different egg masses; samples 7-8: apple snails collected from South China Agricultural University in Guangzhou, Guangdong P. canaliculata Egg grains of different egg masses; samples 9-10: apple snails collected from Yuyao, Zhejiang P. maculata Egg grains of different egg masses; samples 11-12: apple snails collected from Guangxi University in Nanning, Guangxi P. maculata Egg grains of different egg masses; samples 13-14: apple snails collected from Fuj...
example 3
[0053] Example 3: Detection of two invasive apple snail samples at different developmental stages
[0054] The samples used for the detection of two kinds of apple snail samples at different developmental stages included:
[0055] Sample 17: Apple snails collected from Tangpu Village, Jieyang Airport District, Guangdong P. canaliculata egg;
[0056] Sample 18: Apple snails collected from Tangpu Village, Jieyang Airport District, Guangdong P. canaliculata On the third day of hatching, young snails;
[0057] Sample 19: Apple snails collected from Tangpu Village, Jieyang Airport District, Guangdong P. canaliculata into a snail;
[0058] Sample 20: Apple snails collected from Yuyao, Zhejiang P. maculata egg;
[0059] Sample 21: Apple snails collected from Yuyao, Zhejiang P. maculata On the fifth day of hatching, young snails;
[0060] Sample 22: Apple snails collected from Yuyao, Zhejiang P. maculata Become a snail.
[0061] 1. Genomic DNA extraction
[0062] Take...
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