Primer pair and kit for detecting folate metabolism-related gene polymorphism in hypertensive patients

A gene polymorphism and folic acid metabolism technology, which is applied in the field of primer pairs and kits for detecting folate metabolism-related gene polymorphisms in hypertensive patients, can solve the problem of not particularly high specificity, fluctuating accuracy of test results, and clinical practicability. Can't exactly match, etc.

Inactive Publication Date: 2018-01-16
CHANGSHA 3G BIOTECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0009] At present, among the existing publicly reported literature, only the Chinese patent CN201510675462.8 applied by our research team in 2016 has carried out the "gold standard" (PCR-direct sequencing method) for MTHFR genotyping detection in hospitals. However, the technical solution involved in this patent CN201510675462.8, after the two products were put into the clinical market, especially in the process of large-scale application in hospitals, it was found that the specificity of the designed primers and kits was not yet high. It is extremely high, and the accuracy of the test results will occasionally fluctuate. It is speculated that there may be an adaptability problem between the design of the primers and the environment of the actual molecular diagnostic laboratory in the hospital. The need for two genotyping of metabolism MTHFR and MTRR has caused the problem that the clinical practicability cannot be fully matched; therefore, the kit containing the two genes of folic acid metabolism MTHFR and MTRR in patients with hypertension was redesigned and optimized and the corresponding PCR system was stable After investigating the environment of clinical molecular diagnosis laboratories in various hospitals and statistically analyzing the results of problematic test reports, we comprehensively re-optimized the design of the primers for the research and development projects of the two gene kits, MTHFR and MTRR. Optimized the PCR reaction system of the new kit, and significantly improved the product performance and clinical practicability of the new kit

Method used

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  • Primer pair and kit for detecting folate metabolism-related gene polymorphism in hypertensive patients
  • Primer pair and kit for detecting folate metabolism-related gene polymorphism in hypertensive patients
  • Primer pair and kit for detecting folate metabolism-related gene polymorphism in hypertensive patients

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0080] Embodiment 1: the preparation of kit (30 tests / box)

[0081] 1. Design and synthesis of primers and probes

[0082] For the polymorphic sites of folic acid metabolism-related genes in human hypertensive patients, mainly MTHFR C677T codon, MTHFR A1298C codon and MTRR A66G codon, select specific mutation sites, and use PyroMark AssayDesign2.0 software to design primers The most important factor affecting the accuracy of the kit is primers, including amplification primers and sequencing primers; wherein the amplification primers and sequencing primers are first purified by PAGE, and then purified by HPLC, wherein the MTHFRC677T forward amplification primer, MTHFR The 5' ends of the A1298C reverse amplification primer and the MTRR A66G reverse amplification primer were labeled with biotin.

[0083] Table 1. Mutation site and type

[0084]

[0085]

[0086] The amplified sequence is shown in Table 2:

[0087] Table 2. Specific amplification primers and primer sequen...

Embodiment 2

[0112] Embodiment 2: the use of kit

[0113] 1. Sample testing

[0114] Dissolve the dry powder of the primers (the validity period of the primers is 1 month after dissolution). Prepare the system according to the number of templates: take the PCR reaction solution, add dissolved primers, uracil DNA glycosylase, and Taq DNA polymerase, aliquot the system, add sample DNA, blank control substance or positive control substance as templates, and form PCR reaction system. Perform PCR amplification according to the PCR reaction procedure.

[0115] The main components of MTHFR C677T, MTHFR A1298C and MTRR A66G systems are as follows:

[0116] Table 10. Main components of MTHFR C677T system

[0117]

[0118] Table 11. Main components of MTHFR A1298C system

[0119]

[0120] Table 12. Main components of MTRR A66G system

[0121]

[0122]

[0123] The system reaction procedure is as follows:

[0124] Table 13. PCR reaction program

[0125]

[0126] After the ampli...

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Abstract

The invention relates to a primer pair and a kit for detecting folate metabolism-related gene polymorphism in hypertensive patients, and belongs to the technical field of in vitro nucleic acid detection. The primer pair comprises a forward amplification primer, a reverse amplification primer and a sequencing primer, wherein the 5' end of the reverse amplification primer is labeled with biotin. Thekit comprises a PCR (Polymerase Chain Reaction) solution containing a forward amplification primer and a reverse amplification primer, a sequencing primer, uracil DNA (Deoxyribonucleic Acid) glycosylase, Taq polymerase and a positive control product. The kit provided by the invention has the advantages of accurate detection result, high specificity, short detection period, and simple operation, and the clinical inspection requirements can be effectively met; in addition, the kit also has the advantages of real-time monitoring of reaction progress, and short reaction time, the PCR product canbe used for sequencing on a pyrosequencing instrument after being simply treated, the sensitivity is higher than that of a gold standard method, i.e., a capillary electrophoresis sequencing method, and the kit is more applicable to mutation analysis.

Description

technical field [0001] The invention relates to the technical field of in vitro nucleic acid detection, in particular to a primer pair and a kit for detecting gene polymorphisms related to folic acid metabolism in hypertensive patients. Background technique [0002] Folic acid is a compound composed of pterinidine, p-aminobenzoic acid and glutamic acid, and is a water-soluble B vitamin. It exists in many plants and animal tissues, the human body cannot synthesize it, and must be taken from the outside world. [0003] Folic acid is a cofactor for enzymes that play an important role in DNA and RNA synthesis. It provides a one-carbon unit for the de novo synthesis of nucleotides and participates in methyl transport in the methylation cycle of amino acids. Its active unit in the body is 5-methyl base tetrahydrofolate. On the other hand, folic acid is the most important coenzyme in the metabolism of homocysteine ​​(Hcy), and its deficiency will lead to metabolic disorders in th...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6883C12N15/11
Inventor 滕祥云黄少亚
Owner CHANGSHA 3G BIOTECH
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