DNA frameworks for circular RNA overexpression and their applications
An overexpression and circular technology, applied in the field of DNA framework, can solve the problems of low overexpression efficiency and achieve the effect of easy construction, simple design, and various choices
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Embodiment 1
[0027] Example 1: construction of has_circ_0001727 overexpression vector
[0028] 1. Sequence design of hsa_circ_0001727 overexpression framework:
[0029] The linear DNA sequence encoding the hsa_circ_0001727 circular RNA was obtained from the circBase database. The sequence is shown in SEQ ID NO.3.
[0030] According to the above-mentioned general circRNA overexpression DNA framework sequence design principle, the DNA sequence of hsa_circ_0001727 queried is replaced by [N] in the sequence of formula I n , to obtain the dedicated overexpression framework DNA sequence of hsa_circ_0001727, as shown in SEQ ID NO.4.
[0031] And further, in other embodiments, such as figure 1 As shown, n can also adopt 2, 3, 4, 5, 10, 20, 30, 40, 50, 100, 200, 300, 400, 500, 1000, 2000, 3000 or even more multiples, which can be the same N or a different N.
[0032] 2. Submit the dedicated overexpression framework DNA sequence of hsa_circ_0001727 to Nanjing GenScript Company for sequence synt...
Embodiment 2
[0073] Example 2: qPCR detection of hsa_circ_0001727 overexpression effect in 293T cells after hsa_circ_0001727 overexpression plasmid transfection
[0074] 1, qPCR primer design and synthesis
[0075] divergent primer-F: CAGGTCAAGTTCATGGACCTG
[0076] divergent primer-R: ATTCAGACTTACCTGAAGTA
[0077] The primer sequences were synthesized by Shanghai Huada Gene Company.
[0078] 2. 24 hours before transfection, digest 293T cells in the logarithmic growth phase with trypsin, pass to a six-well plate, 37°C, 5% CO 2 Cultured in an incubator. After 24 hours, when the cell density reaches 70%-80%, it can be used for transfection.
[0079] 3. Replace the cell culture medium with serum-free medium before transfection.
[0080] 4. Add 25ug of the prepared hsa_circ_0001727 overexpression plasmid DNA solution to a sterilized centrifuge tube, mix well with the corresponding volume of Opti-MEM, and adjust the total volume to 1.5ml.
[0081] 5. Shake Lipofectamine 2000 reagent gently...
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