Multi-omics data analysis system and data conversion method thereof

A technology of omics data and analysis system, applied in the field of multi-omics data analysis system and its data conversion, which can solve problems such as inability to solve biological problems and inability to clearly explain molecular biological mechanisms.

Pending Publication Date: 2021-09-10
BGI TECH SOLUTIONS
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

[0003] However, with the deepening of research, it is impossible to clearly explain its molecular biological mechanism or solve all biological problems from a single aspect.

Method used

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  • Multi-omics data analysis system and data conversion method thereof
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  • Multi-omics data analysis system and data conversion method thereof

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Experimental program
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Embodiment 1

[0036] refer to figure 1 In the first aspect of the present invention, a multi-omics data analysis system 1 is provided, including an interactive module 11, a processing module 12 and a plurality of omics databases 13, and the interactive module 11 is used to provide users with interactive forms to Collect information about its data analysis requirements belonging to one or more omics databases; it is also used to present the returned data to users.

[0037] The processing module 12 is configured to extract or convert associated data matching the analysis requirement information from one or more omics databases according to the data analysis requirement information and return it to the interaction module; the plurality of groups The scientific database 13 includes a genomics database, a transcriptomics database, an epigenomics database and a proteomics database. Optionally, the plurality of omics databases 13 may also include a metabolomics database.

[0038] refer to figu...

Embodiment 2

[0058] refer to Figure 12 , the second aspect of the present invention provides a data conversion method for a multi-omics data analysis system, comprising the following steps: S100. Provide users with an interactive form to collect their analysis of data belonging to one or more omics databases Requirement information; S200. Extract or convert associated data matching the analysis requirement information from one or more omics databases according to the data analysis requirement information; S300. Display the associated data matching the analysis requirement information to the user.

[0059] Further, in step S200 of some embodiments of the present invention, the extracting or converting the associated data matching the analysis requirement information from one or more omics databases according to the data analysis requirement information includes the following steps: Extract data display requirement information, data analysis requirement information, and data conversion req...

Embodiment 3

[0062] A third aspect of the present invention provides an electronic device, including: one or more processors; a storage device for storing one or more programs, when the one or more programs are used by the one or more The processor executes, so that the one or more processors implement the method provided by the first aspect of the present invention.

[0063] refer to Figure 14 , the electronic device 500 may include a processing device (such as a central processing unit, a graphics processing unit, etc.) 501, which may be loaded into a random access memory (RAM) 503 according to a program stored in a read-only memory (ROM) 502 or loaded from a storage device 508 Various appropriate actions and processing are performed by the programs in the program. In the RAM 503, various programs and data necessary for the operation of the electronic device 500 are also stored. The processing device 501 , ROM 502 and RAM 503 are connected to each other through a bus 504 . An input / out...

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Abstract

The invention relates to a multi-omics data analysis system and a data conversion method thereof. The analysis system comprises an interaction module, a processing module and a plurality of omics databases, the interaction module is used for providing an interactive form for a user so as to collect data analysis demand information of the user on one or more omics databases; the processing module is used for extracting or converting associated data matched with the analysis demand information from one or more omics databases according to the data analysis demand information and returning the associated data to the interaction module; and the plurality of omics databases includes a genomics database, a transcriptomics database, an epimics database, and a proteomics database. Different data analysis requirements of the user for one or more omics are collected in a mode of interacting with the user, and different analysis and mining of multiple omics data are realized by utilizing a mutual mapping relation of different omics data.

Description

technical field [0001] The invention belongs to the field of biological information, and in particular relates to a multi-omics data analysis system and a data conversion method thereof. Background technique [0002] With the initiation of genome projects for more and more species, research in the field of biology has entered the era of "omics". Through high-throughput sequencing and bioinformatics technology, genomics is used to study the structural positioning, function, evolution, editing, etc. of the genome; transcriptomics studies the expression of RNA expressed in a specific environment and tissue, and shows the degree of gene expression. Dynamic changes and trends; epigenomics focuses on the sum of modified genetic material, observing how organisms affect gene expression without changing the DNA sequence; proteomics research is the collection of proteins contained in a sample, directly reflected The function of the sample changes. Omics research has promoted the dev...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G06F16/22G06F16/25G06F16/26
CPCG06F16/2282G06F16/254G06F16/26
Inventor 石明明唐冲揭文才白洁孙宇欣
Owner BGI TECH SOLUTIONS
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