Kit and method for integrally and comprehensively detecting five complex genetic diseases
A kit and technology for genetic diseases, applied in biochemical equipment and methods, microbial determination/examination, DNA/RNA fragments, etc., can solve the problem of low diagnostic speed and efficiency, low throughput of molecular diagnostic technology, and large family economy of patients. pressure and other problems, to achieve the effect of improving the degree of standardization, high operability, and high timeliness
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Embodiment 1
[0145] An integrated and comprehensive detection kit for Duchenne muscular dystrophy, thalassemia, spinal muscular atrophy, hereditary deafness and congenital adrenal hyperplasia in this embodiment, the kit includes two sets of probe sets exon_cnv and gene_variants .
[0146] Among them, the exon_cnv probe set is designed to accurately locate the 5' flanking region, the 3' flanking region, the start and end positions of each exon region and some intron regions of DMD, HBA1, HBA2 and HBB genes, A set of probes designed by selecting the SNP sites located at each start position and end position, the coverage density is an average of 25 SNP sites / 100kb. SNP site selection principle, included in the Thousand Genomes Project database, the minimum allele frequency is greater than 0.1, remove polynucleotides, remove SNPs with GC content > 70% in the upstream and downstream 50bp sequences, and remove SNPs with the same gene in the human genome Source SNP loci. At the same time, for t...
Embodiment 2
[0245] Such as figure 1 As shown, the method for the integrated comprehensive detection of Duchenne muscular dystrophy, thalassemia, spinal muscular atrophy, hereditary deafness and congenital adrenal hyperplasia in the examples in this embodiment comprises the following steps:
[0246] S1: Collected samples: a total of 117 samples, 66 males and 51 females, all of which had mutation results verified by other techniques. Among them, 35 patients with Duchenne muscular dystrophy (23 males and 12 females), including 10 patients with SNV and 25 exon CNV patients; 20 patients with α-thalassemia (12 males and 8 females), All were deletion mutations; 41 patients with spinal muscular atrophy (22 males, 19 females), 40 exon-level CNV patients, and 1 SNV patient; 11 patients with hereditary deafness (6 males, 5 females) example), all of which were SNV mutations; 10 cases of congenital adrenal hyperplasia patients (3 males, 7 females), all of which were SNV mutations, were used as positi...
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