One-step multi-segment DNA molecule splicing method, kit and application thereof
A DNA molecule and kit technology, which is applied in the field of one-step multi-segment DNA molecule splicing, can solve the problems of time-consuming, limited selection of enzyme cleavage sites, and labor, and achieve the effects of reducing sample addition operations, increasing operating efficiency, and reducing operating costs.
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Embodiment 1
[0071] Example 1: Optimization of annealing temperature in the one-step multi-segment DNA molecule splicing method of the present invention
[0072] Experimental Materials:
[0073] Select 3 double-stranded DNA sequences F1, F2, F3 with obvious inverted repeats and high GC (each DNA contains two sequences of sense strand and antisense strand, a total of 6 sequences), 10units / μLT4 PNK;
[0074] Citrate buffer (ie 20×SSC buffer) components:
[0075] 12mM Tris-HCl, 4M NaCl, 400mM C 6 H 5 Na 3 O 7 , 1.8mM EDTA, pH 7.5;
[0076] T4 Polynucleotide Kinase Buffer (T4 PNKbuffer) Components:
[0077] 70mM Tris-HCl, 10mM MgCl 2 , 9mM DTT, pH 7.5;
[0078] Among them: Tris plays the role of pH buffer, DTT plays the role of preventing T4 kinase from being oxidized by high temperature, and salt ions are necessary for the formation of DNA double strands.
[0079]Experimental operation: Pipet 2 μL of 6 DNA sequences of 0.02 nmol / μL to be spliced (sequence information is as follows ...
Embodiment 2
[0090] Example 2: Comparison of the advantages and disadvantages of the one-step multi-segment DNA molecule splicing method of the present invention and the prior art two-step multi-segment DNA molecular splicing method in the success rate of splicing DNA fragments containing obvious inverted repeats
[0091] Experimental Materials:
[0092] Select 3 double-stranded DNA fragments F4, F5, F6 containing obvious inverted repeats (each DNA contains two sequences of sense strand and antisense strand, a total of 6 sequences), 10units / μL of T4 PNK;
[0093] 20×SSC buffer and T4 PNKbuffer components are the same as in Example 1;
[0094] Experimental operation:
[0095] In the prior art, the two-step multi-segment DNA molecule splicing method is as follows: Step 1: DNA fragments whose bases are complementary to each other are sequentially melted in a buffer of 20×SSC buffer and a high temperature environment of 96°C (temperature control module of a PCR instrument). , maintained for ...
Embodiment 3
[0107] Embodiment 3: Comparison of the advantages and disadvantages of the one-step multi-segment DNA molecular splicing method of the present invention and the prior art two-step multi-segment DNA molecular splicing method in the success rate of splicing DNA fragments with high GC and poly structure
[0108] Experimental Materials:
[0109] Select 3 double-stranded DNA fragments F7, F8, F9 with high GC and poly structure (each segment of DNA contains two sequences of sense strand and antisense strand, a total of 6 sequences, the sequence information is shown in Table 5 below), 10units / μL of T4 PNK enzyme;
[0110] 20×SSC buffer and T4 PNKbuffer components are the same as in Example 1;
[0111] Experimental operation:
[0112] The experimental operations of the prior art two-step multi-segment DNA molecule splicing method (scheme E) and the one-step multi-segment DNA molecule splicing method of the present invention (scheme F) are the same as those in Example 2;
[0113] t...
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