Automated segmentation of three dimensional bony structure images

Abstract

A computer-implemented system: at least one processor communicably coupled to at least one nontransitory processor-readable storage medium storing processor-executable instructions or data receives segmentation learning data comprising a plurality of batches of labeled anatomical image sets, each image set comprising image data representative of a series of slices of a three-dimensional bony structure, and each image set including at least one label which identifies the region of a particular part of the bony structure depicted in each image of the image set, wherein the label indicates one of a plurality of classes indicating parts of the bone anatomy; trains a segmentation CNN, that is a fully convolutional neural network model with layer skip connections, to segment semantically at least one part of the bony structure utilizing the received segmentation learning data; and stores the trained segmentation CNN in at least one nontransitory processor-readable storage medium of the machine learning system.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS[0001]This application is a continuation of U.S. patent application Ser. No. 16 / 154,747, filed Oct. 9, 2018, entitled “Automated Segmentation of Three Dimensional Bony Structure Images,” which claims priority under 35 U.S.C. § 119 to European Patent Application No. 17195826.7, filed Oct. 10, 2017, entitled “Automated Segmentation of Three Dimensional Bony Structure images,” the disclosures of each of which are hereby incorporated herein by reference in their entirety.TECHNICAL FIELD[0002]The present disclosure generally relates to automated segmentation of three dimensional images of a bony structure, useful in particular for the field of computer assisted surgery, diagnostics, and surgical planning.BACKGROUND[0003]Image guided or computer assisted surgery is a surgical procedure where the surgeon uses tracked surgical instruments in conjunction with preoperative or intraoperative images in order to indirectly guide the procedure. Image guided ...

AI Technical Summary

Benefits of technology

The patent describes a method for training a machine learning system to segment anatomical images of bones. The method involves receiving data of labeled image sets, which include images of the bone structure and labels identifying different parts of the bone. The data is then used to train a segmentation neural network model, which can accurately identify and segment the different parts of the bone structure. The trained model can be stored in a nontransitory processor-readable storage medium and used in a machine learning system for automated segmentation of images of bones. The method can also involve modifying the image data to improve the accuracy of the model, such as by adding noise or adjusting the brightness or contrast levels of the image. Overall, the method provides a reliable and accurate way to segment bones using machine learning techniques.

Problems solved by technology

In the field of image guided surgery, low quality images may make it difficult to adequately identify key anatomic landmarks, which may in turn lead to decreased accuracy and efficacy of the navigated tools and implants.

Furthermore, low quality image datasets may be difficult to use in machine learning applications.

The downside is increased radiation exposure to the patient.

These survivors, who are estimated to have experienced doses slightly larger than those encountered in CT, have demonstrated a small but increased radiation-related excess relative risk for cancer mortality.

However, low dose settings may have an impact on the quality of the final image available for the surgeon.

This in turn can limit the value of the scan in diagnosis and treatment.

As these coils are rapidly switched on and off they create the characteristic repetitive noise of an MRI scan.

Low quality images may pose a diagnostic challenge as it may be difficult to identify key anatomical structures or a pathologic process.

Low quality images also make it difficult to use the data during computer assisted surgery.

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