A diagnosis and treatment system for the natural therapy includes a detection module, a scheme making module, a dredging module, an adjustment module, an acupuncture module, a supplying module, a correcting module, a motion management module, a restoration and regeneration module, and an evaluation module; the detection module can perform constitution identification, meridian-collateral detection, quantum detection and carotid artery blood vessel examination; the scheme making module can make a treatment scheme according to data detected by the detection module; the dredging module can dredge meridians and qi and blood; the adjustment module can adjust qi and blood, yin and yang, acid-base, and five internal organs; the acupuncture module can perform heat simulation and yin and yang meridian adjustment; the supplying module can perform Tai Ji, energy supplying, personalized wall-breaking resuming, and dietary therapy; the correcting module can correct spines; and the motion management module can perform rhythm treatment and motion management. The diagnosis and treatment system can effect a permanent cure according to the pathogenesis of cells of a human body, is not a medicine treatment system, can avoid harmful side-effects, can treat both principal and secondary aspect of diseases, can cure the diseases, can prevent and cure the diseases, can cure various diseases at the same, and is high in efficiency.