Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Haynaldia villosa 6VS chromosome specific molecular marker 6VS-UT and its application

A 6VS-UT, 6VS-UTF technology, applied in the field of molecular biology and genetic breeding science, can solve the problems of long marker sequence, instability, harsh PCR reaction system and reaction conditions, etc., to achieve strong specificity and stability. Good results

Inactive Publication Date: 2013-01-02
JIANGSU UNIV
View PDF1 Cites 5 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, in general, these markers have the disadvantage of instability in marker-assisted selection breeding, one reason is determined by the type of marker, such as RAPD marker OPT17 1400 and OPT17 1900 ; Secondly, due to the long marker sequence (mostly close to or exceeding 1000bp), the harsh requirements of the PCR reaction system and reaction conditions, and the poor reproducibility of PCR results
These shortcomings are not conducive to the application of marker-assisted selection technology in wheat breeding practice

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Haynaldia villosa 6VS chromosome specific molecular marker 6VS-UT and its application
  • Haynaldia villosa 6VS chromosome specific molecular marker 6VS-UT and its application

Examples

Experimental program
Comparison scheme
Effect test

Embodiment

[0026] 1. Design of primers

[0027] Select the conserved genes on the short arm of chromosome 3 of Brachypodium, perform BLAST analysis in NCBI or Graingenes database, retrieve the wheat EST sequence BE445603, and design primers with Primer Premier 5.0 software, the primer sequences are:

[0028]UT-P1: 5'-CCAAATGAAGCGTATTGTGCTTG-3' (SEQ ID NO.1),

[0029] UT-P2: 5'-GTAGATGGTCTGATCAAATTCTTCTGGT-3' (SEQ ID NO. 2).

[0030] 2. Screening of 6VS chromosome-specific EST-STS markers in T. villosa

[0031] (1) PCR amplification: Genome extraction was performed using A. villosa, common wheat, and the translocation line T6AL.6VS of wheat-T. Perform PCR amplification after DNA, 10μL PCR reaction system contains about 10~20ng template DNA, 1×PCRbuffer, 1.5mmol L-1MgCl2, 200mmol L-1dNTP, the final concentration of the two primers is 0.2μmolL-1, 0.5U Taq For DNA polymerase, supplement the reaction system with sterile distilled water to 10 μL; the PCR reaction program is: 94°C pre-denatu...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

Relating to the technical field of molecular biology and genetic breeding science, the invention discloses a molecular marker 6VS-UT specifically tracing Haynaldia villosa 6VS chromosome and its application. In the invention, primers can be designed according to a wheat EST (expressed sequence tag) sequence BE445603 able to be electronically positioned on the short arm of chromosome 3 of brachypodium distachyon, corresponding DNA can be amplified and cloned from Haynaldia villosa and common wheat genomes, and based on sequencing, specific molecular marker primers can be further designed, with the concrete sequences shown as SEQIDNO.5 and SEQIDNO.6. When conducting PCR on the marker primers, a 301bp specific DNA band can be amplified, so that Haynaldia villosa 6VS chromosome and anti-wheat powdery mildew traits controlled thereby can be quickly and effectively traced. Thus, the Haynaldia villosa 6VS chromosome specific molecular marker 6VS-UT has a strong practical value in wheat anti-powdery mildew molecular marker assisted selective breeding.

Description

technical field [0001] The invention relates to the fields of molecular biology and genetic breeding science and technology, in particular to a molecular marker for specifically tracking the 6VS chromosome of T. villosa and its usage. Background technique [0002] Wheat is one of the three major food crops in the world, and it is also the first food crop in my country's total output. It is one of the important determinants of ensuring my country's food security. Wheat is often affected by biotic or abiotic stresses during its growth process. Wheat powdery mildew is a worldwide wheat disease. In recent years, with the improvement of farmland water conservancy facilities and water and fertilizer conditions in my country, its harm has been increasing year by year. The wheat-T6AL.6VS translocation line bred by distant hybridization and chromosome engineering technology shows high resistance or immunity to the currently discovered physiological races of powdery mildew, and its p...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): C12N15/11C12Q1/68
Inventor 何华纲朱姗颖别同德霍金金李晶晶
Owner JIANGSU UNIV
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products