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Fluorogenic quantitative polymerase chain reaction (PCR) detection assay kit for complementary deoxyribonucleic acid (cDNA) sequence of mouse beta-actin

A detection kit and fluorescence quantitative technology, applied in the field of detection kits and fluorescence quantitative PCR detection kits, can solve the problems of narrow detection linear range, low sensitivity and poor specificity, and achieve wide detection linear range, high sensitivity and specificity. strong effect

Inactive Publication Date: 2013-06-26
NAT INST FOR FOOD & DRUG CONTROL
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] So far, the fluorescent quantitative PCR kits used to detect the cDNA sequence of mouse β-actin have defects such as poor specificity, low sensitivity, and narrow detection linear range to varying degrees, which need to be improved

Method used

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  • Fluorogenic quantitative polymerase chain reaction (PCR) detection assay kit for complementary deoxyribonucleic acid (cDNA) sequence of mouse beta-actin
  • Fluorogenic quantitative polymerase chain reaction (PCR) detection assay kit for complementary deoxyribonucleic acid (cDNA) sequence of mouse beta-actin
  • Fluorogenic quantitative polymerase chain reaction (PCR) detection assay kit for complementary deoxyribonucleic acid (cDNA) sequence of mouse beta-actin

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0040] Construction and identification of embodiment 1 plasmid standard

[0041] 1.1 Construction of plasmid standard

[0042] A 126bp gene fragment (5' CCGATGCCCTGAGGCTCTTTTCCAGCCTTCCTTCTTGGGTATGGAATCCTGTGGCATCCATGAAACTACATTCAATTCCATCATGAAGTGTGACGTTGACATCCGTAAAGACCCTCTATGCCAACAC3') was inserted into the Sam I restriction site of pUC57 plasmid (purchased from Shanghai Sangon Bioengineering Technology Service Co., Ltd.). The plasmid standard was successfully constructed, and the schematic diagram of the pUC57 plasmid is shown infigure 1 .

[0043] 1.2 Sequencing identification

[0044] The plasmid pUC57 was digested, and the sequence of the digested product was determined, and the plasmid standard was successfully constructed.

Embodiment 2

[0045] Design and preparation of embodiment 2 specific primers and probes

[0046] 2.1 Design of specific primers and probes

[0047] The cDNA sequence of β-actin (GeneID: 218370) was obtained from the NCBI gene bank by Blast method, and a pair of specific primers and a probe were obtained after screening based on this template:

[0048] Upstream primer (FP): 5'CCTGAGGCTCTTTTCCAGCC3' (SEQ ID No.1),

[0049] Downstream primer (RP): 5'TAGAGGTCTTTACGGATGTCAACGT3' (SEQ ID No. 2),

[0050] Probe: 5'TCCTTCTTGGGTATGGAATCCTGTGGC3' (SEQ ID NO. 3).

[0051] The reporter group at the 5' end of the probe was labeled with FAM, and the quencher group at the 3' end was labeled with TAMRA; the length of the amplified product was 109bp. Both primers and probes were prepared as 100 μmol / L stock solution and diluted 10 times with sterile water for injection before use.

[0052] 2.2 Specific identification of the specific primer pair (SEQ ID No.1 and SEQ ID No.2) on the plasmid standard

[0...

experiment example 3

[0059] Experimental example 3 specificity experiment of fluorescent quantitative PCR kit of the present invention

[0060] The mouse genome (genome) was used as the positive amplification object, and the irrelevant virus HSV (virustemplate) and no template control (NTC) were used as negative controls, and the designed primers were used for melting curve analysis to verify the specificity.

[0061] For specific results, see Figure 4 . The experimental results show that the specific primers of this kit have a single product peak for the mouse genome, and the two negative controls have no amplified product peaks, and even no primer dimer peaks. The experimental results show that the primers of this kit are specific. strong.

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Abstract

The invention discloses a fluorogenic quantitative polymerase chain reaction (PCR) detection assay kit for the complementary deoxyribonucleic acid (cDNA) sequence of a mouse beta-actin. The assay kit comprises the following components: fluorescent polymerase chain reaction liquid, specific primers, a fluorescently-labeled probe and sterilization liquid. The specific primers consist of primers shown in SEQ ID No.1 and SEQ ID No.2; and the nucleotide sequence of the probe is shown in SEQ ID No.3. The fluorogenic quantitative PCR detection assay kit for the cDNA sequence of the mouse beta-actin is developed through screening the specific primers and the fluorescently-labeled probe by aiming at the cDNA sequence of the mouse beta-actin; and the assay kit has the advantages of strong specificity, high flexibility, good repeatability, wide detection linear scope and the like, can accurately quantify the mouse beta-actin gene, and can provide a reference for the expression quantity of a targeted gene.

Description

technical field [0001] The invention relates to a detection kit, in particular to a fluorescent quantitative PCR detection kit for cDNA sequence of mouse β-actin, which belongs to the field of quantitative detection of mouse β-actin cDNA. Background technique [0002] β-actin, β-actin, is a member of the actin family and plays an important role in maintaining cell structure, intracellular movement, cell division and other cell physiological activities. β-actin gene is one of the more widely used housekeeping genes. Housekeeping genes refer to a class of genes that are expressed in all cells, and their products are necessary to maintain the basic life activities of cells. When performing quantitative PCR, the relative concentration of gene expression can be obtained by calculating the ratio of the target gene to the housekeeping gene. [0003] So far, the fluorescent quantitative PCR kits used to detect the cDNA sequence of mouse β-actin have defects such as poor specificit...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68G01N21/64
Inventor 李波苗玉发霍艳周晓冰耿兴超王三龙
Owner NAT INST FOR FOOD & DRUG CONTROL