Novel application of gene TBX3
A new use, gene technology, applied in the direction of peptide source, peptide, animal/human peptide, etc., can solve the problem of unclarified TBX3 expression change regulation trophoblast cells, etc., to improve the efficiency of embryo implantation and the success rate of assisted reproduction, expand The effect of testing standards
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Embodiment 1
[0016] Construct a new model SCBAV based on the informatics model to detect the development of trophoblast cells in the peri-implantation period. Total variation of at least 40% of the number); 2. Utilize Gap statistics and K-means clustering analysis of cell subgroups at each time point, wherein Gap statistics determine the number of cells in each subgroup at a specific time point, K-means Clustering classifies the number of clusters determined by Gap statistics; 3. Constructs cell lineage trajectories by iteratively associating the most correlated subpopulations between two time points.
[0017] Further, to detect genes that conform to the model in the peri-implantation trophoblast single-cell transcriptome, the gene needs to conform to two parameters of the model: 1. The regulatory factor must have a stable expression difference (expression) in the two lineages whose trajectories diverge ; 2. High degree of expression difference (dispersion) in the cell population before di...
Embodiment 2
[0022] The method and model of in vitro knockdown of TBX3 gene and control trophoblast cells JEG-3 in differentiating into syncytiotrophoblast cells
[0023] In vitro 8-bromo-cyclic AMP (8-Br-cAMP) induced differentiation of trophoblast cell line - choriocarcinoma cell line JEG-3 into syncytiotrophoblast cells, including detecting the number of syncytia formation and syncytial cell markers Expression of hCGβ.
[0024] Further, the method for knocking down the expression of TBX3 is a lentivirus targeting control sequence and TBX3 sequence, and the target sequence is as follows:
[0025]
[0026] The specific method is as follows: construct a lentiviral plasmid containing the target sequence, transfect it into 293T cells, discard the culture medium after mixing and culturing for 8 hours, add PBS buffer to wash, replace with fresh medium, continue to cultivate, and collect Virus culture solution, centrifuged to obtain lentivirus containing target control sequence and TBX3 seq...
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