Blood mRNA detection kit and detection method

A technology for detection kits and blood, applied in the directions of DNA/RNA fragments, recombinant DNA technology, biochemical equipment and methods, etc., can solve allele loss, does not solve complex mixed plaques, and cannot break through the detection sensitivity of complex mixed plaques. Bottlenecks and other problems to achieve the effect of perfect separation

Active Publication Date: 2020-05-01
SHANXI MEDICAL UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At present, in forensic science, specific mRNA molecules cannot be used alone to identify individuals, and are only used to infer the type of body fluid spots, and to use mRNA and DNA co-extraction technology to achieve spot identification and individual identification
However, although the combination of mRNA molecules and DNA has achieved the purpose of identifying the type of body fluid spots and individual recognition, it has not solved the problem of complex mixed spots.
[0004] Although the next-generation sequencing platform has a good ability to analyze simple mixed spots, it has insurmountable obstacles in the analysis of complex mixed spots in terms of sequencing fragment splicing, sequencing errors, and the detection of small components of unbalanced mixed spots.
In the traditional analysis method, events such as the loss of alleles, the appearance of new alleles, and shadow bands will also occur. During the analysis, multiple individuals will share the same allele, which makes it difficult to interpret the identification results, and subjective deviations even occur. mistake
For mixed plaques with an extremely unbalanced composition ratio, it is difficult to find the cell components of secondary donors (<10%), resulting in the inability to break through the bottleneck of detection sensitivity for complex mixed plaques (5~10%)
[0005] Moreover, traditional methods can only use the analysis results in mixed spots to compare with suspects. Therefore, it is difficult to directly identify suspects using blood information in mixed spots, which is a major problem in the current research on complex mixed spots.

Method used

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  • Blood mRNA detection kit and detection method
  • Blood mRNA detection kit and detection method
  • Blood mRNA detection kit and detection method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0033] Example 1. Screening of mixed plaques.

[0034] 1. Prepare the template.

[0035] Whole blood RNA was extracted using the RNAiso Plus kit (Takara). After quantification, 100 ng of RNA was used as a template for reverse transcription using the GoScript Reverse Transcription Kit (Promega). Obtain template cDNA.

[0036] 2. Compound amplification and purification.

[0037] 1) Add template cDNA representing 5ng RNA to 10 μL reaction system: 5 μL 2×Mastermix; 1 μL 10×Primer Mix (see Table 2 for primer concentration), make up the reaction system to 10 μL with water. The PCR thermocycling conditions are as follows: 95°C for 10 min; 30 cycles of 95°C for 30s, 60°C for 30s, and 72°C for 20s; 72°C for 5min.

[0038]2) Purification system for complex amplification product: 3.8 μL of amplification product, 1.3U SAP (shrimp alkaline phosphatase), 6U Exo Ι (exonuclease Ι), make up the reaction system to 10 μL with water. Purification conditions: 37°C, 1h; 95°C, 15min.

[0039] ...

Embodiment 2

[0048] Example 2. Screening of old plaques.

[0049] Use this kit to use the blood spot sample stored at room temperature for 6 months as a template for detection, the results are shown in Figure 4 , and all typing results were obtained.

Embodiment 3

[0050] Example 3. Screening of extremely unbalanced mixed plaques.

[0051] Use this kit to amplify and SNaPshot type the template containing 0.1ng RNA, the results are shown in Figure 5 , and also obtained all typing results.

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Abstract

The invention discloses a blood mRNA detection kit and a detection method. The blood mRNA detection kit contains nine pairs of specific multiple PCR primers shown in SEQ ID NO.1-18 as shown in description and 16 SNP single-base extension primers shown in SEQ ID NO.19-34 as shown in description, and is used for detecting 16 SNP molecular markers on five kinds of blood specific mRNA molecules, operation of detecting blood RNA, which accounts for as low as 1% or of which the content is as low as 0.1 ng, in complex mixed stains can be completed, blood can be separated from other body fluid and skin tissues precisely, a source is traced back to fast and accurately, and a suspect is positioned.

Description

technical field [0001] The invention relates to the technical field of biological detection, in particular to a blood detection kit and a detection method. Background technique [0002] In forensic work, complex mixed plaque is one of the most common biological samples, and it has always been the focus and difficulty of inspection. Complex mixed plaques include: (1) mixed plaques composed of multiple body fluids; (2) extremely unbalanced mixed plaques (where the composition ratio of one component is less than 10%). The mainstream technology for analyzing mixed plaques composed of multiple body fluids at home and abroad is to type STR based on single cell separation technology, capillary electrophoresis or next-generation sequencing platforms. [0003] Some mRNA molecules in blood are specific to body fluids and tissues. These specific mRNAs can only be expressed and detected in blood, while other body fluids do not. At present, in forensic medicine, specific mRNA molecules...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6888C12N15/11
CPCC12Q1/6888C12Q2600/156C12Q2600/16
Inventor 张更谦刘紫东严江伟李泽琴
Owner SHANXI MEDICAL UNIV
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