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Double-donor mediated drug/fluorescence collaborative screening-based diallelic editing system

A biallelic gene and editing system technology, applied in genetic engineering, using vectors to introduce foreign genetic material, vectors, etc., can solve the problem of low efficiency of biallelic homozygotes, and achieve the goal of promoting gene function research and transgenic animal production Effect

Pending Publication Date: 2020-10-30
NORTHWEST A & F UNIV
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  • Description
  • Claims
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AI Technical Summary

Problems solved by technology

However, at present, one kind of donor is mainly used to edit the target genes of the two sister chromosomes, resulting in three kinds of gene-edited cells with different repair results after repairing by the cell's own double-strand break repair mechanism: 1) Two sister chromosomes Cells that have been repaired by the NHEJ pathway; 2) monoallelic edited cells with one sister chromosome repaired by NHEJ and the other sister chromosome with HDR repair; 3) biallelic edited cells with both sister chromosomes repaired by the HDR pathway
[0004] Existing donor strategies are less efficient in obtaining biallelic homozygotes (for example, Chinese patent CN 106191116 A, CRISPR / Cas9-based exogenous gene knock-in integration system and its establishment method and application, Zhang Zhiying, etc.), urgently needed Development of a more efficient biallelic gene editing system

Method used

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  • Double-donor mediated drug/fluorescence collaborative screening-based diallelic editing system
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  • Double-donor mediated drug/fluorescence collaborative screening-based diallelic editing system

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Embodiment Construction

[0044] The present invention will be described in further detail below in conjunction with the accompanying drawings and embodiments. The embodiment takes the biallelic editing of the amyloid precursor protein (Amyloid precursor protein, APP) gene of HEK293T cells as an example, and describes the three sets of biallelic editing systems in the present invention in detail. This embodiment is used to explain the present invention, but not to limit the protection scope of the present invention.

[0045] 1. Primer Design

[0046] The primers involved in the biallelic editing test of the APP gene in HEK293T cells are shown in Table 1.

[0047] Table 1. Primer List

[0048]

[0049]

[0050]

[0051] Note: The primer APP-Right arm-F is underlined in order of PAM mutation (CGG-CTG), target site mutation (GA-TC), and the generation of Xba

[0052] Amino acid synonymous mutation (G-A) of I, in brackets, "-" is in front of the original sequence, followed by the mutated sequen...

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Abstract

The invention discloses a double-donor mediated drug / fluorescence collaborative screening-based diallelic editing system. The system comprises two donor carriers, the donor vector sequence comprises aleft target gene homologous sequence, a right target gene homologous sequence, a point mutation site and an exogenous sequence located between the left target gene homologous sequence and the right target gene homologous sequence. The exogenous sequences are divided into a plurality of expression cassettes with thymokinase screening genes, green fluorescent proteins and puromycin resistance genesand a plurality of expression cassettes with thymokinase screening genes, red fluorescent proteins and bleomycin resistance genes. The gene editing system constructed by the invention can be used forcarrying out accurate and efficient diallelic editing on the genome.

Description

technical field [0001] The invention belongs to the technical field of genetic engineering, and relates to a gene editing system based on a double-strand break repair mechanism, in particular to introducing mutations and exogenous screening genes into two biallelic loci when the genome is repaired by homologous recombination to obtain stable Inherited transgenic cell lines. Background technique [0002] Genome editing technology relies on artificial specific nucleases to create double-strand breaks on the genome and the resulting DNA repair pathways to achieve gene editing. Clustered Regularly Interspaced Short Palindromic Repeats / CRISPR-associated genes (CRISPR / Cas) system and the previous two generations rely on the artificial sequence specificity of protein module and nucleotide pairing recognition Compared with nuclease (ZFN and TALEN) systems, the CRISPR / Cas system relies on pair recognition between nucleotides and has obvious advantages in gene editing. Among them, t...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/90C12N15/85C12N15/65
CPCC12N15/907C12N15/8509C12N15/65C12N2800/107
Inventor 张智英李欣憶徐坤孙冰钱泓润
Owner NORTHWEST A & F UNIV
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