Specific molecular marker primer and method for identifying 'Xianhu series' dendrobium candidum
A Dendrobium officinale, molecular marker technology, applied in biochemical equipment and methods, microbial determination/inspection, DNA/RNA fragments, etc. problem, to achieve the effect of high sensitivity and simple method
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Embodiment 1
[0029] 1. Extraction of genomic DNA from Dendrobium officinale germplasm to be tested
[0030] Take 0.3-0.5 g of the germplasm of Dendrobium officinale to be tested, extract the genomic DNA of the germplasm of Dendrobium officinale to be tested by CTAB method, conduct electrophoresis on the obtained DNA with 1.5% agarose gel to check the purity, and use the Thermo Fisher Scientific Company The DNA concentration was detected by NanoDropTM 1000 ultra-micro UV spectrophotometer, then diluted to 50ng / μL, and placed in a 4-degree refrigerator for later use.
[0031] 2. Synthesize specific molecular marker primers
[0032] Molecular marker primers based on the specific sequence of Dendrobium officinale, upstream primer GLMI001-F: 5'-AACTGACATGCAAGAGTCGC-3' and downstream primer GLMI001-R: 5'-ATCTGCCAGCAAGGATGAGG-3', were synthesized by Shanghai Shenggong.
[0033] 3. PCR amplification of specific molecular marker primers (DK001-F / R)
[0034] PCR amplification system (total volume ...
Embodiment 2
[0040] Example 2: Stability test
[0041] According to the method of Example 1, the specific molecular marker DK001 was used to detect the "Dendrobium series" Dendrobium officinale germplasm of the same batch of 4 varieties (lines) with different repetitions. The results are shown in figure 2 , get consistent results:
[0042] Numbers 1 to 3 are individuals of Dendrobium candidum "Xianhu No. 1", and specific DNA bands between 250bp and 1500 bp are not amplified; those numbered 4 to 6 are individuals of Dendrobium candidum "Xianhu No. 2". At the same time, DNA bands of about 250bp and 1500bp were amplified; the numbered 7 to 9 were the individual Dendrobium officinale "Xianhu No. 3", and only one DNA band of about 1500bp was amplified; the numbered 10 to 12 were "Xianhu No. 4" Dendrobium officinale only amplified a DNA band of about 250bp.
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