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NRF2 gene knockout for treating cancer

A gene and cancer technology, applied in the field of knockout NRF2 composition, can solve the problem of loss of efficacy

Pending Publication Date: 2022-03-01
克里斯蒂安娜基因编辑研究公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Chemotherapy is often ineffective or loses its effectiveness after a period of time during or shortly after the treatment regimen ends

Method used

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  • NRF2 gene knockout for treating cancer
  • NRF2 gene knockout for treating cancer
  • NRF2 gene knockout for treating cancer

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0130] Example 1: Establishment of NRF2 knockout clone A549 cell line using CRISPR-guided gene editing approach

[0131] method

[0132] cell culture conditions

[0133] Human lung cancer A549 cells were purchased from ATCC (Manassas, VA, USA). A549 is a mature non-small cell lung adenocarcinoma cell line that contains a mutation in the Kelch domain of KEAP1 that results in overexpression of NRF2. It is often used as a standard for discovering new therapeutic agents against cancer. Cells were thawed according to the manufacturer's protocol, and cultured in F-12K medium supplemented with 10% FBS (ATCC, Manassas, VA, USA) and 1% penicillin-streptomycin solution (ATCC, Manassas, VA, USA) ( ATCC, Manassas, VA, USA). Cells were grown and maintained at a concentration of 2x10 3 and 1x10 4 live cells / cm 2 between, and at 37°C and 5% CO 2 incubate. Determine the cell number using a hemocytometer.

[0134] Guide RNA design and construction

[0135] Input the NRF2 gene codi...

Embodiment 2

[0150] Example 2: Increased chemosensitivity in the NRF2 knockout A549 cell line

[0151] method

[0152] MTS cell proliferation assay

[0153] Cell viability was assessed using the CellTiter 96 aqueous non-radioactive cell proliferation assay (Promega, Madison, WI). with 2x10 3 cells / well were inoculated with the A549 cell line and incubated for 24 hours. Then, the cell culture medium was aspirated, the cells were washed with PBS, and then exposed to MTS reagent for 3 hours. After 3 hours of MTS bioreduction by proliferating cells, the absorbance of the formazan product was measured on an Infinite 2000 PRO microplate reader (Tecan, Mannadorf, Switzerland) using a 450 nm filter. Cell viability after drug exposure was assessed using the CellTiter 96 Aqueous Non-Radioactive Cell Proliferation Assay. with 2x10 3 cells / well were inoculated with the A549 cell line and incubated for 24 hours. Cells were then treated with cisplatin, carboplatin, or a combination of cisplatin a...

Embodiment 3

[0156] Example 3: Genetically Reengineered A549 Cells Show Slower Growth Rate and Increased Chemosensitivity in a Lung Cancer Xenograft Mouse Model

[0157] method

[0158] Animal experiments and statistical analysis

[0159] The animal experiments presented herein were performed at Washington Biotech Inc., Simpsonville Maryland, under the animal use and care protocols approved by the Animal Care and Use Committee of Washington Biotechnology Inc. (SOP 505, SOP 520, SOP 522, SOP 1610, SOP 1650) AAALAC accredited Animal Welfare Assurance Number A4192-01). Human xenograft models were established using previously reported methods. Kellar et al., Biomed Res. Int. 2015, 1–17 (2015). Female athymic nude mice (Envigo, 5-6 weeks old) were used in this study. Approximately 5x 10 cells suspended in PBS containing 20% ​​Matrigel 6 Cells (wild-type A549 or homozygous knockout (clonal expansion 2-11)) were injected subcutaneously into the right flank of each mouse. Once palpable, tumo...

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Abstract

The present disclosure provides a guide RNA (gRNA) comprising a DNA binding domain and a clustered regularly spaced short palindromic repeat (CRISPR) associated endonuclease protein binding domain, where the DNA binding domain is complementary to a target domain from the NRF2 gene. The disclosure also provides a nucleic acid sequence encoding the gRNA. The disclosure also provides a method of treating cancer in a subject comprising administering to the subject a therapeutically effective amount of a pharmaceutical composition comprising a clustered regularly spaced short palindromic repeat (CRISPR)-associated endonuclease and a guide RNA that is complementary to a target domain of the NRF2 gene in the subject. Also provided are methods of treating cancer comprising administering a pharmaceutical composition comprising: a DNA sequence encoding a guide RNA complementary to a target domain of an NRF2 gene in the subject; and nucleic acid sequences encoding clustered regularly spaced short palindromic repeats (CRISPR) associated endonucleases.

Description

[0001] related application [0002] This application claims the benefit of U.S. Provisional Application No. 62 / 852,076, filed May 23, 2019, which is hereby incorporated by reference in its entirety. [0003] sequence listing [0004] The Sequence Listing associated with this application is submitted in electronic format via EFS-Web and is hereby incorporated by reference in its entirety. The name of the file containing the sequence listing is 130949_00120_SEQUENCELISTING.TXT. The size of the text file is 13KB, and the text file was created on May 22, 2020. technical field [0005] The present disclosure relates to compositions and methods for knocking out NRF2 to treat cancer using clustered regularly interspaced short palindromic repeat (CRISPR) / endonuclease gene editing. Background technique [0006] Cancer is currently one of the leading causes of death in developed countries. A cancer diagnosis often involves serious health complications. Cancer can cause disfigu...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/113C12N9/22A61K31/7105A61P35/00
CPCC12N15/113C12N9/22A61K31/7105A61P35/00C12N2310/20C12N2800/80C12N15/1135C12N15/63A61K48/00
Inventor E·克米科P·比亚尔克
Owner 克里斯蒂安娜基因编辑研究公司