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Primer probe combination for methylation detection of cervical cancer related genes and application of primer probe combination

A primer probe, methylation technology, applied in the biological field, can solve the problems of increasing the psychological pressure of the subjects, and achieve the effect of reducing and additional inconvenience, reducing psychological pressure, and improving the detection effect

Pending Publication Date: 2022-03-22
GUANGZHOU LBP MEDICINE SCI & TECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Compared with conventional cervical cancer screening and cervical cancer diagnosis methods, methylation detection mainly has the following characteristics: (1) It can make up for the shortcomings of the current domestic routine cervical cancer screening methods such as the high rate of missed detection of TCT detection and the high false positive rate of HPV detection ; (2) It can detect whether there are precancerous lesions in cervical cells earlier than conventional TCT detection and colposcopy; (3) It also has a good early warning effect in the follow-up monitoring of cervical cancer, so the degree of gene methylation can be used as a test Whether the cervical cells are normal, and the dynamic index of the occurrence and development of cervical cancer, but the currently commonly used method for detecting the methylation of cervical cancer-related genes needs to extract the genomic DNA of the cervical tissue to be tested, such as CN107287294A discloses a cervical cancer-related gene methylation Primers, probes, kits and their applications for the detection of methylation levels, frequent tissue testing can easily cause additional trauma and increase the psychological pressure of the subjects

Method used

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  • Primer probe combination for methylation detection of cervical cancer related genes and application of primer probe combination
  • Primer probe combination for methylation detection of cervical cancer related genes and application of primer probe combination
  • Primer probe combination for methylation detection of cervical cancer related genes and application of primer probe combination

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0053] In this example, a combination of primers and probes was designed for the detection of methylation of cervical cancer-related genes.

[0054] Select representative PAX1, FAM19A4, and miR124-2 as candidate detection genes for cervical cancer, fully analyze the distribution of methylation sites of these genes, and design primers and probes for detection. The sequences of the primers and probes are shown in the table 1.

[0055] Table 1

[0056]

[0057]

Embodiment 2

[0059] This embodiment provides a kit for detecting the methylation of cervical cancer-related genes. The kit contains the primers designed in Example 1, PCR reaction solution, positive quality control, negative quality control, and ddH 2 O, the positive quality control product adopts human methylated genomic DNA, and the negative quality control product adopts human unmethylated genomic DNA.

Embodiment 3

[0061] This embodiment utilizes the kit in embodiment 2 to detect, comprising the following steps:

[0062] (1) Collect samples from patients with cervical lesions and samples from patients without cervical lesions, and use QIAamp DNA Mini Kit (Cat: 51304) nucleic acid extraction reagent from QIAGEN GMBH for DNA extraction;

[0063] (2) Use ZYMO RESEARCHCORPORATION's EZ DNAMethylation-Gold Kit (Cat: D5006) sulfite conversion kit to convert the extracted sample DNA, negative quality control and positive quality control into sulfite;

[0064] (3) Prepare the fluorescent PCR reaction system according to Table 2. The amplification program is: 95°C, 5min; 95°C, 10s, 60°C, 30s, 10 cycles; 95°C, 10s, 57°C, 30s, 35 cycles, collect fluorescence;

[0065] Table 2

[0066]

[0067]

[0068] (4) Interpretation of results:

[0069] 1) The positive quality control product reaction tubes FAM, CY5, ROX, and VIC should all have signals; the negative quality control product VIC should ...

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Abstract

The invention discloses a primer probe combination for methylation detection of cervical cancer related genes and application of the primer probe combination. The primer probe combination comprises a primer pair and a probe which are used for detecting methylation of the PAX1 gene, the FAM19A4 gene and the miR124-2 gene. The primer combination for detecting methylation of PAX1, FAM19A4 and miR124-2 genes is designed by adopting a unique strategy, the primer probe combination has high specificity, can be used for detecting by directly utilizing a plasma sample, has a better detection effect, is high in specificity and sensitivity, is beneficial to relieving psychological stress and extra inconvenience of a subject, and can be used for detecting the methylation of the PAX1, FAM19A4 and miR124-2 genes. Gene methylation changes in the occurrence and development process of cervical cancer are tracked and detected, and the problem that the occurrence and development process of cervical cancer is difficult to monitor is solved.

Description

technical field [0001] The invention belongs to the field of biotechnology, and relates to a combination of primers and probes for detecting cervical cancer-related gene methylation and an application thereof. Background technique [0002] Cervical cancer is a common malignant tumor in gynecology. The high incidence age of carcinoma in situ is 30 to 35 years old, and the age of invasive cancer is 45 to 55 years old. According to the data released by the National Cancer Center in 2018, 90% of cervical cancer patients have developed into invasive cancer when they are diagnosed , The survival rate is greatly reduced, and the prognosis is also poor. Therefore, early screening of cervical cancer is an important way to effectively prevent cervical cancer, and the early screening program of cervical cancer also provides favorable support for reducing the incidence and mortality of cervical cancer. [0003] In the current cervical cancer screening process, primary screening of human...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6886C12N15/11
CPCC12Q1/6886C12Q2600/154
Inventor 陈奎桥陈绍宇何瑰欧焕金
Owner GUANGZHOU LBP MEDICINE SCI & TECH
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