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10-23 desoxyribonuclease of bacillus resisting tubercle branch

A technology of mycobacteria and deoxyribozyme, applied in antibacterial drugs, medical preparations containing active ingredients, enzymes, etc., can solve problems such as unfavorable binding and affecting efficacy

Inactive Publication Date: 2006-11-22
朱道银 +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

If the deoxyribozyme itself forms a relatively stable base pairing, it will not be conducive to its combination with the target RNA, thus affecting its efficacy

Method used

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  • 10-23 desoxyribonuclease of bacillus resisting tubercle branch
  • 10-23 desoxyribonuclease of bacillus resisting tubercle branch
  • 10-23 desoxyribonuclease of bacillus resisting tubercle branch

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0032] The design and synthesis of each 10-23 deoxyribozyme of the present invention:

[0033] The sequence of the Mycobacterium tuberculosis H37Rv icl gene was retrieved from GenBank, and the secondary structure of the icl mRNA was simulated by using the software RNA Structrur3.7. According to the simulated structure diagram ( figure 2 ) Select the protruding loop part of the secondary structure that is easy to combine with the deoxyribozyme and meet the requirements of the 10-23 deoxyribozyme target site as the initial target site for cutting. According to the sequence of each target site, 10-23 deoxyribozymes complementary to it and with different substrate-binding domain lengths were designed.

[0034] The 10- The total hybridization free energy ΔG of the 23 deoxyribozyme and the substrate RNA, select the 10-23 deoxyribozyme for different initial target positions, and the ΔG is in the range of -20<ΔG<-25 as the initial 10-23 deoxyribozyme Ribozyme.

[0035] Oligo5.0 so...

Embodiment 2

[0039] Acquisition of Mycobacterium tuberculosis icl mRNA:

[0040] Extract Mycobacterium tuberculosis H37Rv (purchased from the Institute of Microbiology, Chinese Academy of Sciences, and also available from the Chinese strain Preservation Center, purchased from the American Type Culture Collection.) Genomic DNA. P1 and P2 primers were designed according to the ICL coding sequence registered in GenBank.

[0041] P1: 1 gcggatccaccgttaaggagttgtct 26

[0042] P2: 1 gcaagcttctagtggaactggccct 25

[0043] The icl gene ( image 3 A).

[0044] PCR reaction parameters:

[0045] Template DNA: 2 μl

[0046] 10×PCR buffer (containing magnesium chloride): 5 μl

[0047] dNTP (10mmol / L): 2μl

[0048] Primer P1: 1 μl

[0049] Primer P2: 1 μl

[0050] Taq plus DNA polymerase (5u / μl): add 1 μl of sterilized deionized water to a final volume of 50 μl

[0051] PCR reaction conditions: 95°C, 3min; (94°C, 1min; 62°C, 50sec; 72°C, 90sec;) × 30 cycles; 72°C, 7min.

[0052] After recovery...

Embodiment 3

[0064] Observation of the cutting effect of each 10-23 deoxyribozyme on icl mRNA:

[0065] 1

2

3

4

5

Tris-HCl (PH7.0, 0.25mol / L)

icl mRNA (700 μg / ml)

Mgcl2 (0.1mmol / L)

10-23 DNAzyme (1μmol / L)

DEPC treated deionized water

2

2

1.5

2 (SEQ ID NO: 1)

2.5

2

2

1.5

2 (SEQ ID NO: 2)

2.5

2

2

1.5

2 (SEQ ID NO: 3)

2.5

2

2

1.5

2 (SEQ ID NO: 4)

2.5

2

1.5

-

4.5

[0066] Each EP tube was incubated at 37°C for 60 minutes, then taken out, and separated by 3.5% denatured polyacrylamide gel electrophoresis. Then use the nucleic acid silver staining kit (purchased from Beijing Dingguo Company, also available from Beijing Zhongshan Company and Shanghai Shenggong Company) to carry out staining, collect images with a gel imaging system, measure the optical density value of each band, and calculate cut percentage. ...

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Abstract

The four 10-23 deoxyribozymes with anti-mycobacterium tuberculosis activity provided by the present invention: SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, and SEQ ID NO: 4 act on Mycobacterium tuberculosis ic1RNA Different parts can specifically cut off icl mRNA, inhibit the expression of Mycobacterium tuberculosis icl gene, so that Mycobacterium tuberculosis in latent infection state cannot use fatty acids as carbon source, thereby killing Mycobacterium tuberculosis in latent state . Therefore, the use of the deoxyribozyme in the preparation of tuberculosis treatment, especially the therapeutic drug for tuberculosis latent infection is proposed.

Description

Technical field: [0001] The invention relates to 10-23 deoxyribozyme against mycobacterium tuberculosis and its use in preparing medicine for tuberculosis treatment, especially tuberculosis latent infection treatment. technical background: [0002] Tuberculosis is the number one cause of death from a single pathogenic bacterial disease. Every year, 9 million people worldwide get sick and about 3 million people die from tuberculosis. Although modern chemotherapy for tuberculosis has achieved great success, it is still difficult to shorten the course of treatment for smear-positive tuberculosis to less than 6 months. Many developing countries with severe epidemics still cannot afford the required medical expenses, and the long course of treatment also makes the Reduced compliance of patients can easily lead to insufficient chemotherapy for patients, which often results in a high recurrence rate after treatment, and is conducive to the emergence and prevalence of drug-resistant...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N9/00C12N15/52A61K38/43A61P31/06
Inventor 朱道银李俊明
Owner 朱道银
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