D-aminoacylase mutants
A kind of technology of amino acid and acetyl, applied in the field of D-aminoacylase mutant
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Embodiment 1
[0274] Embodiment 1: Preparation of chromosomal DNA of denitrifying Alcaligenes xylose subspecies MI-4 strain
[0275] Chromosomal DNA was prepared from Alcaligenes denitrificans subsp. xylose MI-4 strain (FERM P-9413) according to the method described in Nuclei acids Res. 8, 4321 (1980).
Embodiment 2
[0276] Example 2: Cloning of D-aminoacylase gene by PCR from Alcaligenes denitrificans subsp. xylose MI-4 strain
[0277] According to the description in the reference (Biosci.Biotech.Biochem, 59,2115 (1995)), a sense primer ADD-ATG1 (SEQ ID NO: 4) and an antisense primer ADD-TGA1 (SEQ NOID: 5) were synthesized, they Corresponds to the 5'- and 3'-untranslated regions of the D-aminoacylase gene of Alcaligenes xylosoxydans subsp. xylosoxydans A-6. Perform a PCR reaction using a 50-μl reaction solution containing 70 ng of chromosomal DNA of Alcaligenes denitrificans subsp. xylose MI-4 strain, 1.0 U ExTaq DNA polymerase, Taq polymerase buffer, 0.2 mM dNTP, 5% DMSO, and primers ADD-ATG1 and ADD-TGA1 (10 pmol each), were denatured at 94°C for 30 seconds and extended at 72°C for 2 minutes for 30 cycles. PCR obtained a highly specific PCR product of about 1.5kbp.
Embodiment 3
[0278] Example 3: Sequencing of PCR products.
[0279] The DNA fragment obtained in Example 2 was purified with GFX kit (Pharmacia). The nucleotide sequence of the purified DNA fragments was analyzed. Nucleotide sequence analysis of DNA was performed by PCR in a PRISM310 Genetic Analyzer (Applied Bio Systems) using the BigDyeTerminator Cycle Sequencing ready Reaction Kit (Applied Bio Systems). The primers used were ADD-189R (SEQ ID NO: 6), ADD-524R (SEQ ID NO: 7), ADD-466F (SEQ ID NO: 8), ADD-1032R (SEQ ID NO: 9), ADD- 987F (SEQ ID NO: 10), and ADD-TGA1.
[0280] The amino acid sequence encoded by the obtained sequence is shown in SEQ ID NO:1. The nucleotide sequence of this D-aminoacylase was compared with the known D-aminoacylase clone of Alcaligenes xylosoxidans subspecies xyloseoxidans A-6 strain. Taking the first letter A of the start codon ATG as 1, only two nucleotide substitutions, 360-T->C and 435-C->T, were found between these two clones. The amino acid sequen...
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