Wheat artificial micromolecule RNA expression vector as well as construction method and application thereof
A technology of expression vector and binary expression vector, applied in the fields of molecular biology and genetic engineering
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Embodiment 1
[0045] Example 1 Using the wheat tae-miR171 precursor sequence as the backbone sequence to construct an amiRNA expression vector that interferes with the wheat phytoene dehydrogenase (PDS) gene and its efficiency detection
[0046] According to the pairing characteristics of miRNA and miRNA* when the precursor sequence of tae-miR171 forms a secondary structure, search for sites that meet these conditions in the pds gene coding sequence, and obtain two relatively good sites as target sites after comparison analysis Points: (1) TGGCTTAAGGAATAAAGTAAA, (2) GTTGTTTGCCAAGATTTTCCA, forming an amiRNA corresponding to this site, which basically meets the characteristics of tae-MIR171, such as the first base is U, at the 4th, 9th and 12th positions Bases and miRNA* form mismatches and other characteristics, and the obtained amiRNA precursor sequence has a secondary structure similar to natural tae-MIR171.
[0047] Using the amiR171 precursor sequence containing the designed amiRNA and a...
Embodiment 2
[0073] Example 2 Using the wheat tae-miR171 precursor sequence as the backbone sequence, constructing an amiRNA expression vector and efficiency detection of the RNA polymerase 1 (RNA-dependent RNA-polymerase1, RDR1) gene that interferes with wheat yellow dwarf virus RNA
[0074] According to the pairing characteristics of miRNA and miRNA* when the precursor sequence of tae-miR171 forms a secondary structure, the sites that meet these conditions were found in the coding sequence of the rdr1 gene, and two relatively good sites were obtained as target sites after comparison and analysis Points: (1) CAGCTTTACAGAGGTCAAGAA, (2) CCGTCTCAGATTGGTGAAGGA, forming an amiRNA corresponding to this site, which basically satisfies the characteristics of tae-MIR171, such as the first base is U, at the 4th, 9th and 12th positions Bases and miRNA* form mismatches and other characteristics, and the obtained amiRNA precursor sequence has a secondary structure similar to natural tae-MIR171.
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