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Production of compounds derived from acetyl-coenzyme A

An acetyl coenzyme, compound technology, applied in the direction of adding compounds to stimulate growth, DNA/RNA fragments, recombinant DNA technology, etc., can solve problems such as the lack of metabolic switches

Inactive Publication Date: 2014-01-08
AMYRIS INC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Genetic switches are a common way of achieving this in practice, but may have disadvantages due to, for example, the cost of exogenous inducers, delays in transcription and translation of the switch, and if mutations occur in the genetic switch itself, can also be a source of low productivity
However, metabolic switches do not have these disadvantages

Method used

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  • Production of compounds derived from acetyl-coenzyme A
  • Production of compounds derived from acetyl-coenzyme A
  • Production of compounds derived from acetyl-coenzyme A

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 5

[0084] Example 5 (below) and image 3 A explains the effect of pantothenate compound concentration in the medium on the production of HACD compounds in genetically modified host cells with high metabolic flux through the acetyl-CoA biosynthetic pathway to produce isoprenoid Farnesene. At low pantothenate levels (0.2 mg / L, <1% of the maximum pantothenate concentration tested), HACD compound production was essentially absent. Increased levels of pantothenate compounds were associated with increased production of HACD compounds prior to the flat-topping effect. Further increases beyond 1 mg / L pantothenate (10% of the maximum pantothenate compound concentration tested) resulted in no further increase in HACD compound production.

[0085] Notably, the growth of these cells showed an opposite trend to the production of HACD compounds. image 3 B illustrates the growth of the same strain at the same pantothenate concentration levels tested for HACD compound production. No or low ...

Embodiment 1

[0229] This example describes a method for determining the cell density (OD 600 ) Exemplary method.

[0230] Mix 8 μL of cell culture samples and 92 μL of Triton OD diluent (20g / L Triton X-114, 200mL / L PEG200, 200mL / L 100% ethanol, balance water) in a clean 96-well plate and stir the solution at 1,000RPM 6 minutes and the OD was determined by measuring the absorbance at 600 nm on an M5 spectrophotometer (Molecular Devices, Sunnyvale, CA). 600 .

Embodiment 2

[0232] This example describes an exemplary Nile Red-based method that can be used to determine farnesene titers in yeast cell cultures.

[0233] 98 μL of cell culture samples were transferred into 96-well black polystyrene flat bottom assay plates, and 2 μL of Nile Red (Invitrogen, Carlsbad, CA) dissolved in DMSO at 100 μg / mL was added to each well. Fluorescence levels were immediately measured on an M5 spectrophotometer with excitation at 500 nm and emission at 550 nm.

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Abstract

The present disclosure relates to the use of pantothenate compounds as a non-genetic switch for the production of heterologous acetyl-CoA derived (HACD) compounds in microbial host cells. The invention provides genetically modified microorganisms that are more stable when stored and initially cultured under reduced pantothenate concentrations, cell culture media having reduced concentrations of pantothenate compounds, and methods of producing HACD compounds using the cell culture media and the genetically engineered microorganisms of the invention.

Description

[0001] 1. Cross references to related applications [0002] This application claims priority to US Provisional Patent Application No. 61 / 483,896, filed May 9, 2011, which is incorporated herein by reference. 2. Technical fields [0003] The present disclosure relates to the use of pantothenate (also known as vitamin B5) as a non-genetic switch for regulating the production of heterologous acetyl-CoA-derived compounds by genetically modified host cells. 3. Background technology [0004] The advent of synthetic biology has brought forth the promise of using fermentative microorganisms to produce biofuels, chemical reagents, and biomaterials from renewable sources at industrial scale and quality. For example, functional non-native biological pathways have been successfully constructed in microbial hosts for the production of: precursors of the antimalarial drug artemisinin (see, e.g., Martin et al., Nat Biotechnol 21:796-802 (2003 ); fatty acid-derived fuels and chemicals (e.g...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N1/12C12P7/6427
CPCC12P17/06C12P7/6409C12P7/6427C12N1/38C12P5/007C12P13/04C12P19/62C12N15/52Y02E50/10
Inventor A·梅多斯
Owner AMYRIS INC
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