Method used for high throughput screening of bacterial strains capable of generating 1-deoxynojirimycin

A high-throughput, high-yield technology, applied in the biological field, can solve the problems of cumbersome operation, small sample volume, lack of screening methods, etc., and achieve the effect of simplifying screening steps, saving time, and improving screening efficiency.

Active Publication Date: 2016-06-01
INST OF MICROBIOLOGY - CHINESE ACAD OF SCI
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  • Abstract
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Problems solved by technology

Streptomyces and Bacillus can synthesize DNJ using glucose as a substrate through isomerization, transamination, oxidation, reduction and other steps, but the content of DNJ isolated from them is extremely low
Although the yield of DNJ can be increased by means of genetically engineered bacteria and directed evolution, it is difficult to screen wild-type and genetically engineered mutants that efficiently synthesize DNJ due to the lack of effective screening methods.
[0004] At present, the detection of DNJ mainly adopts reversed-phase high-performance liquid chromatography-ultraviolet detection method, adopts methy

Method used

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  • Method used for high throughput screening of bacterial strains capable of generating 1-deoxynojirimycin
  • Method used for high throughput screening of bacterial strains capable of generating 1-deoxynojirimycin
  • Method used for high throughput screening of bacterial strains capable of generating 1-deoxynojirimycin

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Embodiment 1

[0049] Embodiment 1, the method for high-throughput screening (or identification) high-yield deoxynojirimycin (DNJ) strain

[0050] 1. Screening of strains with high DNJ production

[0051] The DNJ synthetic genes are gabT1, yktc1 and gutB1 (TYB), according to the gene sequence design primer pair 1 (DNJ-for-NdeI: 5'-ATACATATGGGGACGAAGGAAATTACAAA-3', DNJ-rev-SacI: 5'-ATATGAGCTCTTACACCAGCTTCGGATCAGATAC-3') can used to amplify these three genes.

[0052] 1. Acquisition of synthetic DNJ gene

[0053] The genomic DNA of Bacillus atrophaeus ACCC02297 (ACCC02297 of China Agricultural Microorganism Culture Collection Management Center) was extracted, PCR amplification was carried out with primer pair 1, and a PCR product of 3237bp was obtained, which was a fragment containing gabT1, yktc1 and gutB1 (gabT1 gene is in sequence 1 from Nucleotides 1-1269 at the 5' end, yktc1 gene at 1266-2216 nucleotides at the 5' end of sequence 1, gutB1 gene at 2191-3237 nucleotides at the 5' end of s...

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Abstract

The invention discloses a method used for high throughput screening of bacterial strains capable of generating 1-deoxynojirimycin (DNJ). The method comprises following steps: 1, recombinant vectors used for expressing DNJ biosynthetic pathway and original strains used for expressing beta-galactosidase are constructed; 2) error-prone PCR products of corresponding DNJ synthetic genes are obtained; 3, the error-prone PCR products of corresponding DNJ synthetic genes are taken as primers, the recombinant vectors are taken as templates, and MEGAWHOP PCR is carried out so as to obtain an MEGAWHOP PCR plasmid mutant library; and 4, the MEGAWHOP PCR plasmid mutant library is inserted into the original strains, plate coating is carried out so as to obtain a mutant library plate, bacterial colonies on the mutant library plate with color lighter than that of bacterial colonies on a wild bacterial plate are collected, and the collected bacterial colonies are high DNJ yield bacteria. The method can be used for screening bacteria strains high in DNJ yield, low in DNJ yield, or producing no DNJ; screening efficiency is increased; time is saved; and screening steps are simplified.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a method for high-throughput screening of strains producing deoxynojirimycin. Background technique [0002] 1-Deoxynojirimycin (DNJ) ( figure 1 ) is a piperidine polyhydroxyalkaloid that can competitively bind to the substrate-binding pockets of sucrase, trehalase, α-glucosidase, etc., thereby inhibiting its activity, reducing carbohydrate digestion and glucose production, So as to achieve the effect of preventing and treating diabetes. In addition, DNJ also has anti-virus and anti-tumor metastasis effects, which has very important academic significance and practical value for the development of new drugs for diabetes treatment and the development of anti-viral drugs. [0003] Natural DNJ can be produced in plants (mainly Moraceae), animals (mainly silkworms and insects that eat mulberry leaves), and microorganisms (mainly Streptomyces and Bacillus). The current method of synthesi...

Claims

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Application Information

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IPC IPC(8): C12N15/70C12N15/10C12N1/21C12R1/19
Inventor 唐双焱蒋培霞穆姗姗
Owner INST OF MICROBIOLOGY - CHINESE ACAD OF SCI
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