323 results about "High-throughput screening" patented technology

The invention belongs to the technical field of antibacterial peptide activity identification and evaluation, and relates to an antibacterial peptide activity and MIC value combined prediction framework based on cross-modal deep learning, and the framework uses a protein language model ESM2 to respectively carry out token-level semantic embedding coding on an antibacterial peptide sequence and a pathogen protein sequence; performing cross-modal feature extraction and fusion through a multi-branch structure comprising a Mama module, a multi-head self-attention mechanism and DASM 1D convolution; a multi-task decoding structure is adopted to realize antibacterial peptide activity classification and MIC value regression prediction at the same time; according to the method, functional characteristics in the sequence can be effectively mined, the accuracy and generalization ability of antibacterial peptide activity and MIC value prediction are remarkably improved, and a reliable calculation tool is provided for high-throughput screening and rational design of the antibacterial peptide.

The invention discloses a 3-sterone-delta1-dehydrogenase mutant and application of the 3-sterone-delta1-dehydrogenase mutant in preparation of a steroid drug intermediate. The mutant is obtained by performing single mutation or multiple mutation on 551, 468, 48 and 157 sites of an amino acid sequence of 3-sterone-delta1-dehydrogenase as shown in SEQ ID NO: 1. The 3-ketosterone-delta1-dehydrogenase is subjected to molecular modification through directed evolution and semi-rational design, the mutant with improved enzyme activity is screened in a high-throughput mode, the mutant can effectively improve the conversion rate of a substrate 11alpha, 17alpha-dihydroxyprogesterone, and the substrate conversion rate of the mutant ISM-2 is improved to 92.4% compared with 36.7% before mutation.

The invention belongs to the field of biological pharmacy, and discloses a GPCR-based ultramicro drug screening method and application thereof in screening of antipruritic traditional Chinese medicines. According to the invention, an Echo ultrasonic pipetting system is combined with a GPCR function experiment (beta-arrest recruitment) to establish the ultramicro screening method for screening the GPCR ligand. The Echo 550 system utilizes ultrasonic waves to beat liquid into 2.5 nL liquid drops and then transfer the liquid drops into a 384 or 1536 pore plate, rapid and accurate sample adding of at least 2.5 nL (1 / 400 mu L) can be achieved, ultra-micro screening and high-throughput screening can be achieved at the same time, and the method is particularly suitable for screening of itching relieving drugs.

An automated high throughput screening platform for identification of compounds and genomic constructs having mitochondrial function modulating activity and compounds so identified are provided. Use of such compounds for modulating mitochondrial function are also disclosed. A high-throughput screening method of determining genetic mechanisms of action for therapeutic or toxic agents in genetic or pharmacologic models of disease are also provided.

The invention discloses a simulated screening and process optimization method of an anhydrous hydrogen fluoride desulfurization adsorbent, and relates to the technical field of anhydrous hydrogen fluoride, and the method comprises the following steps: constructing a database, and establishing a basic screening library; constructing an intelligent screening engine, and performing force field parameter correction on the materials in the basic screening library to capture a high-polarity solvent effect; calculating and extracting adsorption selectivity, Henry coefficients and working capacity indexes, and screening out a primary candidate material set; a core candidate material is optimized; determining an optimal adsorbent model; the microscopic adsorption data of the optimal adsorbent model are converted into macroscopic process parameters, the macroscopic process parameters are imported into a macroscopic process simulator for prediction, and process optimization is completed. According to the method, the strong polar solvent effect is simulated by constructing the corrected force field environment, and high-throughput screening of the adsorption materials is achieved in combination with an active learning strategy; an electronic grade refinement and modification strategy is utilized to optimize adsorption sites, and microcosmic adsorption data and a macroscopic mass transfer model are coupled to realize accurate prediction and optimization of an adsorption process.

By engineering genetic traits associated with photosynthesis in plants, transgenic plants with increased crop yield can be generated, which will ultimately lead to increased food production in the field. To obtain beneficial genetic traits for enhanced photosynthesis, accelerated evolution is applied under salt stress in a cyanobacteria species, Synechococcus elongatus PCC 7942, by conditionally suppressing its mismatch repair system. Through high-throughput screening for biomass accumulation and sucrose production, it is discovered that specific amino acid changes in the pre-Dl protein of Photosystem II (PSII), encoded by the psbA genes, can improve efficiency of photosynthesis under salt stress, as well as pathogen resistance. Next, the same amino acid changes were made in Arabadopsis and proved that photosynthetic efficiency (measured via growth rate) is also increased in this model vascular plant.

A well plate can include a plastic component having an array of microwells, each defining a respective opening sized to receive and contain a volume of fluid. A printed circuit board (PCB) material can be arranged against and accessible through the microwell openings, allowing fluid contact with the PCB material at a first side. An array of integrated circuits (ICs) can be individually positioned to correspond with respective microwells and electrically interconnected via conductive interconnections within the PCB material, such as to facilitate electronic assays within standardized well plates for high-throughput screening applications.

The invention belongs to the field of microbial breeding and fermentation engineering, and particularly relates to a saccharomyces cerevisiae mutagenesis strain with high yield of S-adenosyl-L-methionine as well as a mutagenesis method and application of the saccharomyces cerevisiae mutagenesis strain. Saccharomyces cerevisiae is induced to generate genetic diversity through multiple rounds of ultraviolet mutagenesis, and high-throughput screening is performed in combination with strain color phenotypic difference; and the mutant strain HY2402-Z18 with high yield of S-adenosine-L-methionine and genetic stability is obtained. The SAM yield of the mutagenic strain is increased by 40.1% compared with that of an original strain, the SAM yield reaches 13.44 g / L when the mutagenic strain is fermented for 60 h in a 5 L fermentation tank system, the unit yield reaches 0.156 g / L / OD, and the methionine conversion rate is 75%. After thalli are collected through centrifugation of fermentation liquor, an S-adenosine-L-methionine product with the purity of 98%-100% can be obtained through purification of ion exchange resin, no by-products are accumulated, the yield, the substrate conversion rate and the production efficiency of the S-adenosine-L-methionine can be remarkably improved when the mutagenesis strain is used for fermentation production, and the production cost is reduced. The production cost is effectively reduced, the product purity and quality are improved, and the method is suitable for industrial large-scale production of SAM.

The invention discloses an esterification reaction lipase screening method based on covalent bond docking, and belongs to the technical field of protein docking simulation. According to the method, parameters of an acylase intermediate are constructed, and then covalent docking and energy screening are performed on the acylase intermediate, so that prediction of lipase reaction activity and substrate selectivity is realized, and the defects that carbonyl carbon cannot be automatically identified, Ser-C covalent bonds cannot be established, double bonds / bond angles cannot be managed, and the reaction efficiency is low in traditional docking are overcome. The problems that in a covalent system, simulation of a nucleophilic attack path lacks a unified distance, angle and dihedral angle constraint system, and automatic and high-throughput screening of multiple lipases and multiple substrates is difficult to achieve are solved.

The invention relates to the technical field of biological detection, and discloses a caenorhabditis elegans reproductive toxicity intelligent evaluation system and an application method.The caenorhabditis elegans reproductive toxicity intelligent evaluation system comprises a standardized exposure and imaging module used for executing a high-flux pollutant exposure experiment under a controlled environment condition and synchronously collecting nematode behavior and gonad image data; and the multi-modal data acquisition unit is connected to the standardized exposure and imaging module and is used for extracting and preprocessing behavioral parameters and reproductive toxicity indexes from the acquired images. According to the method, 12 behavior parameters and 8 core reproductive indexes are automatically extracted by constructing a multi-modal data acquisition unit and utilizing an improved U-Net model and a specific algorithm, so that full-process automation from image acquisition to key index quantification is realized. The problems of low efficiency, large subjective deviation and poor repeatability caused by dependence on manual interpretation in the prior art are solved, and the objectivity of the evaluation result and the high-throughput screening efficiency are remarkably improved.

The invention relates to a gene expression cassette and application thereof. The gene expression cassette comprises a tyrosinase gene, a transcriptional repressor protein gene, a melanin response promoter and a reporter gene, and the reporter gene is located at the downstream of the melanin response promoter and is regulated by the promoter. The gene expression cassette with a specific structure is designed, melanin in cells can be responded, a melanin biosensor can be further constructed by utilizing the gene expression cassette, the gene expression cassette has good specificity, and high-throughput screening of strains can be realized. Furthermore, ALE evolution is carried out on the strain for producing melanin, high-throughput screening is carried out based on a designed sensor, the strain for producing melanin with high yield is obtained, through shake-flask culture and 5L fermentation tank culture, the yield of melanin reaches up to 10.84 g / L and 29.04 g / L respectively, and an efficient and feasible solution is provided for large-scale production of melanin.

The invention relates to a thermal analysis method and a measuring device for a solidification process after modification treatment of aluminum and aluminum alloy, and the thermal analysis method comprises the following steps: adding seed crystal particles into an overheated melt in a vacuum environment or an inert atmosphere through a feeding device; cooling and solidifying the overheated melt, and collecting and recording a cooling curve T-t of the seed crystal particles through a high-speed temperature collecting device; the cooling curve is subjected to derivation calculation, and thermal characteristic parameters in the melt solidification process are represented; comparing the thermal characteristic parameters, and judging the deterioration effect. According to the method, the seed crystal particles are placed into the melt, melt solidification data are collected, and efficient judgment and high-throughput screening of the seed crystal particles and the second-phase modified refined seed crystal particles in the aluminum alloy are achieved by means of the quantitative relation among the seed crystal particle characteristics, the local temperature and the supercooling degree.

The invention discloses a urate oxidase mutant and application thereof in improving the thermal stability of urate oxidase, and belongs to the technical field of biology. The urate oxidase mutant disclosed by the invention is T68L / T75S / E222D / K299E, T68L / T75S / K299E or T75S / K299E, and the urate oxidase mutant disclosed by the invention is T68L / T75S / K299E. According to the method, the key sites influencing the thermal stability are mined in the modes of directed evolution, high-throughput screening, multiple virtual screening and the like, and the stability is improved through mutation. And finally, a plurality of key sites and mutants influencing the stability are excavated, and the thermal stability is improved.

The invention discloses a method for microfluidic high-throughput screening of AKK bacteria. The method comprises the following steps: 1) preparing a microfluidic chip; 2) collecting fresh excrement of healthy volunteers, diluting, and adding a fluorescence labeled antibody to obtain a dispersion phase; and (3) preparing liquid drops by taking paraffin oil and Span-80 as a mobile phase, enabling the liquid drops to enter a liquid drop culture tank through an S-shaped liquid drop circulation channel, culturing, introducing the mobile phase, introducing the liquid drops in the liquid drop culture tank into a liquid drop collection tank, taking out, detecting a fluorescence signal, culturing the liquid drops with the fluorescence signal on the improved brain heart infusion broth solid culture medium, and obtaining the brain heart infusion broth. Obtaining a to-be-identified strain; 4, the strain to be identified serves as a template, PCR amplification is conducted, sequencing is conducted on an amplification product, BLAST sequence comparison is conducted on a sequencing result on an NCBI website, and the target strain AKK bacterium is screened out. The method has the advantages of being high in throughput, simple in experimental process and high in specificity, and the screening efficiency of the AKK bacterium can be improved.

The present disclosure relates generally to methods and systems of producing Schwann cells from pluripotent stem cells under fully defined conditions. The Schwann cells produced by the disclosed methods find applications as models of the enteric nervous system, tools for high throughput screening of potential therapeutics for treatment of enteric neuropathies, and in regenerative medicine.

The invention provides a high-throughput screening method for an AI energized beneficiation flotation reagent, and belongs to the technical field of mineral flotation reagent screening. According to the method, high-throughput screening of multiple candidate mineral flotation reagents is achieved through the flotation performance prediction model constructed through the artificial intelligence model, the research and development cycle and test cost of the mineral flotation reagents can be reduced, and the screening efficiency of the mineral flotation reagents can be improved.

The invention provides a method for high-throughput screening of an alpha-glucosidase inhibitor from boxthorn leaves based on a multi-shell MOF immobilized enzyme, and aims to overcome the bottlenecks of low throughput, tedious operation, high cost and the like of a traditional screening method. The core process of the method comprises the following steps: preparing a boxthorn leaf sample solution and pre-evaluating the in-vitro alpha-glucosidase inhibitory activity; a multi-shell MOF immobilized enzyme technology is coupled with a UPLC-QTOF-MS / MS technology, so that targeted screening, efficient separation and accurate identification of active components are realized; verifying the alpha-glucosidase inhibitory activity of the target compound; and predicting the binding site of the small molecule compound and the enzyme through a molecular docking technology. The method has the core advantages of high specificity, high sensitivity, high flux, repeated utilization of enzyme receptors and the like by depending on the inherent characteristics of an immobilized enzyme technology, can synchronously screen and identify various inhibitors, effectively integrates the resource advantages of a boxthorn leaf natural product and the high efficiency of a modern high-flux screening technology, and has a wide application prospect. And a key technical support is provided for diversified development of diabetes treatment medicines.

This invention belongs to the fields of molecular biology and bioinformatics, specifically relating to a truncated bovine virus-encoded protein phage library, its construction method, and applications. This library covers all 162 known bovine viruses that host bovine subfamily viruses, containing 51,794 non-redundant peptide coding sequences of 56 amino acids each. These peptides are fused and displayed on the surface of the T7 phage capsid, with all coding sequences having a uniform total length of 200 bp. The library construction was achieved through sequence acquisition, truncation and redundancy removal, codon optimization and DNA synthesis, and in vitro ligation and packaging with T7 phage. The resulting library exhibits a positivity rate of 93% and a titer of 2.8 × 10⁻⁶. 10 PFU / mL. This invention features an optimized single-round high-throughput screening process adapted to clinical bovine serum samples, enabling efficient identification of bovine virus B-cell epitopes and providing tools and candidate targets for bovine virus vaccine development and diagnostic reagent development.

The invention relates to a high-yield protein glutaminase Chryseobacterium prion strain and a preparation method thereof. The strain is obtained by carrying out ARTP and NTG compound mutagenesis treatment on an original strain of Chryseobacterium prion and carrying out high-throughput screening on the strain subjected to the compound mutagenesis treatment. The strain is preserved in the China Center for Type Culture Collection, and the preservation number is CCTCC M 20251792. The invention also relates to a method for preparing protein glutaminase by using the strain of the invention. The enzyme activity of the protein glutaminase of the strain is 6 times that of an original strain, and the production efficiency of the protein glutaminase can be remarkably improved.

The invention belongs to the technical field of drug screening, and particularly relates to an in-vitro high-throughput screening system of a PHD2 activity inhibitor and application of the in-vitro high-throughput screening system. The in-vitro high-throughput screening system for the PHD2 activity regulator comprises a pore plate, a small molecule reaction system, an FITC (fluorescein isothiocyanate) labeled peptide fragment and a VBC compound, wherein a GST-PHD2 protein is attached to the surface of an inner cavity of the pore plate; the sequence of the GST-PHD2 protein is shown as SEQ ID NO. 1, the small molecule reaction system contains Tris-HCl, alpha-ketoglutarate disodium and vitamin C, the sequence of the FITC labeled peptide fragment is shown as SEQ ID NO. 2, and the sequence of the VBC compound is shown as SEQ ID NO. 3. The in-vitro high-throughput screening system can sensitively, accurately and efficiently detect the inhibiting effect of small molecular compounds on PHD2 protein activity, and has important scientific value and application prospect.

A high-throughput screening system and method for small molecule-protein interactions includes first immobilizing selected small molecules on a solid matrix. Immobilization is preferably performed via photoaffinity labeling, where a linker is used to bind the small molecule to the matrix. cDNA libraries are constructed based on various human tissues. Tissue mRNA is transcribed into cDNA and transferred to a phage genome to construct a phage display library, which is then mixed with small molecules conjugated to microspheres and incubated. The incubated mixture is washed to remove unbound phages, including non-specific and weakly bound phages. Bound phages are amplified and used for the next round of biopanning. The biopanning cycle is repeated, and then PCR is performed on each plaque obtained from the final round of biopanning. The PCR products from each small molecule experiment are barcoded, merged, and then subjected to next-generation sequencing.

The utility model relates to related technical field of screening technology especially, a kind of high throughput screening device of high-yield strain of wolfberry enzyme, including support plate, the upper surface of support plate is provided with screening mechanism;The high throughput screening device of high-yield strain of wolfberry enzyme, by the setting of screening mechanism, start motor when using, and the liquid needing screening is added to inlet pipe, due to the effect of rotation centrifugation, material is evenly distributed between each disc, and the strain with smaller specific gravity moves upwards along disc wall, enters filtration liquid storage interval, the contact area of material and it is increased by the design of multiple groups of disc, so that more material is rapidly classified under the action of reason, shorten separation time, improve product purity.

The invention discloses an electrocatalyst high-throughput screening platform for an electrocatalytic reaction system and a method thereof. According to the platform, a flowing electrolytic tank and a high-flux pipetting workstation are taken as cores, and gas chromatography (GC) and nuclear magnetic resonance (NMR) rapid product analysis are integrated. The platform adopts an aluminum alloy gantry type four-axis (XYZ1Z2) moving mechanism to realize space positioning of clamping and pipetting; the high-flux pipetting workstation is provided with a gun head storage module, a reagent bottle storage module, a rotary bottle cap module and an electrocatalyst preparation module, so that accurate liquid proportioning and electrocatalyst preparation are realized; a flowing electrolytic tank and the like are arranged in the electrochemical test workstation, so that continuous flowing electrolysis, automatic sample loading and electrolyte circulation are realized; the GC / NMR module is used for rapidly detecting a product on line. The platform realizes whole-process unmanned and repeatable catalyst preparation and high-throughput screening through a unified control circuit and an upper computer. The electrocatalytic reaction system is a carbon dioxide reduction reaction system.

The invention relates to the technical field of biosynthesis, in particular to a biosynthesis process of adenosine triphosphate and equipment thereof. Comprising the following steps: optimizing an adenosine triphosphate synthetase gene sequence, constructing an expression vector, and introducing the expression vector into a yeast host cell; sub-packaging the engineering yeast group in a pore plate for parallel culture, detecting the acid yield and substrate conversion rate data of each micropore, and screening out elite strains; fermenting elite strains, and dynamically feeding materials by an online monitoring and feedback control system; the yeast strain is subjected to precise transformation through codon optimization and gene overexpression driven by a strong promoter; elite strains are quickly identified by adopting high-throughput screening in cooperation with miniaturized parallel fermentation and real-time optical detection; in the fermentation process, a self-control feedback fed-batch technology is introduced, and a culture environment is stabilized in an optimal physiological state through real-time monitoring and dynamic regulation, so that the production potential of engineering bacteria is fully exerted, and the yield of adenosine triphosphate, the substrate conversion rate and the product purity are improved.

The invention discloses a method for drawing a human full-coverage protein interaction network based on digital PCR next-generation sequencing. After the advanced pedestrian 293T cell line obtains mRNA, a modified random primer or an oligo-dT primer is adopted to obtain a cDNA library; carrying out homogenization treatment on the human cDNA library; the method comprises the following steps: transforming plasmids of a BACTH bacteria double-hybrid system to obtain transformed plasmids; carrying out homologous recombination on the transformed plasmids of the sample library and the double-impurity system, and introducing into escherichia coli for screening to obtain positive PPI clones of the library with interaction; and carrying out digital PCR-based next-generation sequencing on the screened clones to draw the human full-coverage protein interaction network. The method is suitable for performing high-throughput screening after thousands of positive PPI combinatorial clones are obtained by'library-to-library 'bacteria or yeast double hybrids, identifying the same cell bar code cDNA combinatorial pairs, and realizing PPI network identification in different species, among species and in hybridization technology system extensive scenes.

The invention discloses a tar absorbent performance prediction and high-throughput screening method, system and equipment and a medium. The method comprises the following steps: constructing an absorption assistant structure library and a tar component structure library; respectively sampling the two structure libraries, establishing a water phase-absorption aid-oil phase model, and carrying out sufficient molecular dynamics simulation until a data set with a specified scale is formed; pre-training the deep learning network model; selecting an actual tar component, determining a tar component descriptor, and screening out an absorption assistant subset by using a pre-trained deep learning network model; the method comprises the following steps: determining absorption aids of a plurality of representative structures in an absorption aid subset, determining absorption rates through experiments, performing fine tuning training on a model to obtain a high-throughput screening model, and predicting all structures in an absorption aid structure library to obtain the absorption aid with the highest absorption rate. The method has the advantages of high-precision prediction, low experiment cost, high expandability and the like, and is suitable for rapid research, development and screening of the absorption additive material.

The application belongs to the field of enzyme engineering and biotechnology, and discloses a 4-hydroxybenzoic acid hydroxylase mutant and application thereof in synthesis of gallic acid or a salt thereof. The 4-hydroxybenzoic acid hydroxylase mutant is obtained through directional evolution modification and high-throughput screening, and has an increased protocatechuate hydroxylase activity by more than 4 times. The 4-hydroxybenzoic acid hydroxylase mutant is expressed by using E. coli, and the obtained recombinant E. coli can efficiently catalyze the conversion of protocatechuate into gallic acid. The 4-hydroxybenzoic acid hydroxylase mutant is expressed in the recombinant E. coli for producing protocatechuate, and the obtained recombinant E. coli can de novo synthesize gallic acid from glucose as a substrate, and the yield reaches 58.65 g / L, and the residual amount of protocatechuate is only 0.33 g / L. The application solves the problem of a large amount of residual protocatechuate in the fermentation process of the existing strains, and can provide an efficient enzyme element for the creation of gallic acid industrial strains.

The invention discloses an adsorption material screening method and system for transfer learning auxiliary material genome design, and belongs to the technical field of intelligent material design and high-throughput screening. The method comprises the following steps: S1, collecting an adsorption material data set of a source domain and a target domain, wherein the adsorption material data set comprises structural parameters, adsorption performance and environmental condition information; s2, establishing a prediction model for a source domain, constructing a transferable feature subspace through maximum mean difference (MMD) and KL divergence analysis, comparing and verifying cross-domain advantages of transfer learning compared with direct training, and adopting random sampling and grouping demonstration to ensure model stability; s3, screening a common framework structure of the source domain and the target domain; s4, designing and optimizing a functional group combination based on material genomics, and generating a target adsorbent design scheme; and S5, synthesizing a preferable material and testing the adsorption performance of the preferable material. According to the method, the limitation of a traditional trial and error method is broken through, cross-system knowledge reuse is achieved through transfer learning, directional development of a high-performance adsorbent is guided in combination with material genome design, and an intelligent solution is provided for adsorption material research and development in the fields of environmental governance, resource recovery and the like.

The invention belongs to the technical field of biological pharmacy, and particularly discloses a Siglec-15 affinity peptide and application thereof. According to the invention, a phage display heptapeptide library high-throughput screening technology is adopted, Siglec-15 affinity peptide 7-8 is obtained through multiple rounds of screening, and the Siglec-15 affinity peptide 7-8 is optimized and modified to obtain a reversed sequence flip peptide d-7-8. Experimental results show that the Siglec-15 affinity peptide can be used for affinity of Siglec-15 protein and blocking the interaction between Siglec-15 and a ligand Sialyl-Tn of Siglec-15, so that the anti-tumor effect is achieved; an in-vitro cell level experiment shows that the Siglec-15 affinity peptide has a relieving effect on inhibition of Siglec-15 on CD8 + T cell proliferation, has an obvious immune activation effect, does not have obvious toxic or side effects, can be used for preparing an anti-tumor drug or a detection reagent taking Siglec-15 as a target spot, and has a relatively good medical application prospect.