Sequencing library building method and reagent based on molecular inverse probe
A molecular reverse probe and sequencing library technology, applied in the field of molecular biology, can solve the problems of time-consuming single-stranded circular library construction, complex enrichment of target regions, and cost-consuming problems, achieving low initial volume and reducing errors , the effect of simple process
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Embodiment 1
[0074] In this embodiment, the genomic DNA (gDNA) of Yanhuang (YH) is used as the experimental material, and a certain site of deafness gene detection is taken as an example.
[0075] The detection sites and nearby sequences are as follows, where underlined bold italics is the site to be detected; the underlined sequence is the sequence at both ends of the target region, which specifically binds to the anchor sequence and extension sequence of the molecular reverse probe.
[0076] 5'-AGGATCGTTGTCATCCAGTCtcttccttagga attcattgcctttggg atcagc acatcttctcaggattcttctcttgttttgtg gccaccactgctctttc ccgcacggccgtccaggagagcactggaggaaagacaCAGGTAGGAACAACAGCCTT-3' (SEQ ID NO: 6).
[0077] According to the above detection sites and nearby sequences, the following molecular reverse probe sequences were designed, in which the underlined sequences were the anchor sequence and extension sequence of the molecular reverse probe.
[0078] 5'-pho_CCCAAAGGCAATGAAT AGGTATCTCAGTTCGGTGTAGGTCGTT...
Embodiment 2
[0098] In this embodiment, human peripheral blood DNA (300ng) is used as the experimental material, and the probe regions are seven regions on the congenital deafness gene 12S-rRNA, GJB2, GJB3, and SLC26A4. The probe site information is shown in Table 3. The CompleteGenomics platform was used as the sequencing platform, and the SE50 sequencing type was adopted.
[0099] table 3
[0100]
[0101]
[0102] The experimental process is as follows:
[0103] 1. MIP hybridization
[0104] The enzyme reaction system is shown in Table 4, wherein the MIP probe is obtained by using the sequences of SEQ ID NO: 1-3 in the first method of the above-mentioned probe preparation.
[0105] Table 4
[0106] components
Dosage
5-300ng
MIP probe
1 fmol
Ampligase buffer
2μL
dNTP (10mM)
2μL
Ampligase
1μL
Phusion
0.5μL
water
Make up 20μL
[0107] Reaction program: 5 minutes at 95°C, 3...
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