Osteosarcoma miRNA detection reference gene identification method
A technique for osteosarcoma and internal reference, which is applied in the field of identification of internal reference miRNA genes to achieve the effect of improving sensitivity, specificity and easy detection
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example 1
[0024] Example 1 Analysis of miRNA expression in peripheral blood of patients with osteosarcoma
[0025] 1. Sample collection
[0026] Peripheral blood of osteosarcoma patients came from hospitalized patients with osteosarcoma, 30 patients with primary osteosarcoma and 20 healthy controls. The patients with primary osteosarcoma and the healthy control group were required to fast for at least 12 hours. At 7:00-8:00 the next morning at room temperature, 10ml of venous blood was drawn into ethylenediaminetetraacetic acid (EDTA) anticoagulant tubes, and peripheral blood was extracted. For mononuclear cell PBMCs, add 1ml Trizol reagent (Invitrogen), mix well, and store the specimen at -80°C for RNA extraction. All blood samples and pathological results should be authentic and reliable, the study was approved by the ethics committee, and the patients gave informed consent.
[0027] 2. Method
[0028] 2.1. Extraction of total RNA from peripheral blood
[0029] According to the in...
Embodiment 2
[0040] The qRT-PCR verification of miRNA in embodiment 2 serum / plasma
[0041] According to the results of chip hybridization, select miRNA molecules that meet the following criteria for further screening by qRT-PCR technology: a) the expression level in osteosarcoma and the control group is in the top 80; b) it is stably expressed in both groups, and the two groups There was no significant difference between them (p≥0.05). According to the above criteria, 6 miRNA molecules (including hsa-miR-128a-5p, let-7d, has-miR-100, has-miR-210-5p, has-miR-222, has- miR-425), the sequences of the six miRNA molecules are shown in Table 1. In addition, since U6 is often used as an internal reference molecule for tissue miRNA detection, U6 was also included in the screening as a candidate molecule in order to verify whether it can be used as an internal reference in serum. By using qRT-PCR technology to verify the above 6 miRNAs and U6 in another group of subjects (including 10 cases of o...
Embodiment 3
[0058] Example 3 Further verification of expression stability
[0059] According to the results of qRT-PCR screening, the combination of has-miR-128a-5p or has-miR-128a-5p / let-7d is a candidate internal reference gene with stable expression. The qRT-PCR method was used to verify its stability in a group of new test samples (including 10 osteosarcoma and 10 control samples), and the results showed that it was stably expressed in both osteosarcoma and normal samples, with relatively good stability.
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