Method and kit for evaluation and prediction of placenta-derived diseases
A placental source and kit technology, which is applied in biochemical equipment and methods, microbial determination/examination, medical automated diagnosis, etc., can solve the problems of lack of mature and reliable screening methods
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Embodiment 1
[0249] Example 1: Using Qiagen kit to extract gDNA from placental tissue of pregnant women
[0250] Experimental Materials
[0251]Frozen placenta tissue (collected from Guangdong Provincial Maternal and Child Health Hospital, clinical research approval number: Yilun No. [201701044]);
[0252] Absolute ethanol (Beijing Chemical Industry, 00500);
[0253] Qiagen animal tissue extraction gDNA kit (Qiagen, 69504);
[0254] Qubit TM dsDNA HS Assay Kit (Thermo Fisher Scientific, Q32851);
[0255] λDNA HindIII digest (Takara, 3403)
[0256] experimental method
[0257] Placental tissue digestion: Take about 25 mg of placental tissue and prepare a digestion solution (180 μL buffer ALT + 20 μL proteinase K), mix it and incubate at 65°C for 4 hours until it is completely digested.
[0258] Cell lysis: vortex the digested product, add lysis buffer AL, absolute ethanol and RNaseA and incubate at room temperature for 10 minutes.
[0259] gDNA binding: Transfer all the samples af...
Embodiment 2
[0264] Example 2: Using MagMAX Cell-Free DNA Extraction Kit to Extract cfDNA from Maternal Plasma
[0265] Experimental Materials
[0266] Stored in Nanke Zhengtu MiniMax TM Peripheral blood from blood collection tubes such as cell-free DNA (cfDNA) noninvasive tubes (Apostle, Inc. Silicon Valley, California.), Cell-Free DNA BCT CE blood collection tubes (Streck, Inc., La Vista, NE) (collected from Maternal and Child Health Care of Guangdong Province Hospital, clinical research approval number: Yilun No. [201701044]);
[0267] Proteinase K (Qiagen, 19133);
[0268] SDS (Sigma, 74255-250G);
[0269] Dynabeads TM MyOne TM Silane (Thermo Fisher Scientific, 37002D);
[0270] MagMAX TM Cell Free DNA Lysis / Binding Solution (Thermo Fisher Scientific, A33600);
[0271] MagMAX TM Cell Free DNA Wash Solution (Thermo Fisher Scientific, A33601);
[0272] Absolute ethanol (Beijing Chemical Industry, 00500);
[0273] Qubit TM dsDNA HS Assay Kit (Thermo Fisher Scientific, Q3...
Embodiment 3
[0286] Example 3: Using the TequilaV3 DNA methylation method to build a library for gDNA or cfDNA
[0287] Experimental Materials
[0288] 7.5-10ng cfDNA or 200ng gDNA;
[0289] EZ DNA Methylation-Gold TM Kit(ZymoReserch, D5006);
[0290] Tequila V3 DNA Methylation Library Construction Kit (Ule Fusheng, EU-TQ-Methy);
[0291] Agencourt AMPure XP magnetic beads (Beckman, A63882);
[0292] EB buffer (Qiagen, 19086);
[0293] DEPC water (Solabao, R1600-500);
[0294] Absolute ethanol (Beijing Chemical Industry, 00500).
[0295] experimental method
[0296] Sulfite Conversion: According to EZ DNA Methylation-Gold TM The kit kit instruction manual prepares the CT conversion reagent and performs CT conversion treatment on the above-mentioned starting amount of cfDNA or gDNA. Wherein, the aforementioned cfDNA or gDNA is obtained by the method described in Example 2.
[0297] End repair: Use the Tequila V3 DNA Methylation Library Construction Kit to prepare end repair re...
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