Gene polymorphism detection kit for vitamin D metabolism marker and detection method and application thereof
A technology for metabolic markers and gene polymorphisms, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, recombinant DNA technology, etc. question
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Embodiment 1
[0040] Embodiment 1, the preparation of kit
[0041] The rapid reaction kit of the present invention designs specific amplification primers and sequencing primers for VDR (FokI) and VDR (BsmI) for amplification and pyrosequencing detection. Designing primers based on rapid amplification technology is one of the keys of the present invention. In order to ensure the amplification speed and detection sensitivity, the amplification length should be controlled at 60-90bp. Gene polymorphism sequence is subject to the public sequence in Genebank.
[0042] (1) The primer sequences of this embodiment are as follows:
[0043] Primer name SEQ ID Sequence (5'~3') modify VDR(FokI) pre-primer 1 CAGCTGGCCCTGGCACTGA VDR(FokI) Back Primer 2 AGGGAAGTGCTGGCCGCCAT 5`Biotin VDR(BsmI) front primer 3 AGTGTGCAGGCGATTCGTA 5`Biotin Primer after VDR(BsmI) 4 GTTCACGCAAGAGCAGAGCC VDR(FokI) sequencing primer 5 CTTGCTGTTTCTTACAGG VDR(Bs...
Embodiment 2
[0050] Embodiment 2, pyrophosphate detection
[0051] The instruments adopted in the present invention are as follows: amplification instrument, pyrosequencer (Wuhan First Biotechnology Co., Ltd.). (1) Reagent preparation (reagent preparation room)
[0052] Take out the reagents in advance, vortex the PCR reaction solution for 15 seconds, and centrifuge at low speed for later use. Determine the number of reactions N, N = number of samples to be tested (n) + number of quality control products (1) + blank control. It is recommended to conduct positive control and blank control analysis for each PCR experiment at the same time. Then the reaction solution was dispensed into PCR reaction tubes at 16 μL / tube. The sealing film of the PCR tube used in the amplification has a concave design matching the heating column at the PCR reaction hole, and its thickness is 85 μm, which has a high degree of fit and fast heat transfer. More preferably, the sealing film of the PCR tube is pene...
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