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Screening method for anti-HBV compounds

A screening method and compound technology, applied in the fields of molecular biology and biomedicine, to achieve highly specific and targeted effects that are conducive to determination

Inactive Publication Date: 2013-08-14
SHANGHAI INST OF MATERIA MEDICA CHINESE ACAD OF SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At present, there is no report that uses the C-terminal amino acid of the core protein as a drug target to screen anti-HBV drugs

Method used

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  • Screening method for anti-HBV compounds
  • Screening method for anti-HBV compounds
  • Screening method for anti-HBV compounds

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0032] Example 1: Construction of the full-length HBV core protein eukaryotic expression plasmid pHBc185 targeting the target sequence HBc-1

[0033] Using pHBV1.3 expressing 1.3 times full-length full-length HBV genome (adw subtype) as a template, the DNA fragment encoding the full-length core protein was cloned and recombined with the pcDNA3.1 plasmid (purchased from Invitrogen), and transformed into E.coli recipient strain DH5α ( Purchased from Tiangen Biochemical Technology Co., Ltd.), after screening and identification, the eukaryotic expression plasmid pHBc185 of the full-length core protein was obtained. Amplification primers are as follows:

[0034] SP / HBc 1 Pst1 (SEQ ID NO: 6)

[0035] 5'-TTTTCTGCAGATGGACATTGACCCGTATAAAGAATTTGGAGC-3',

[0036] ASP / HBc 185 Pst 1 (SEQ ID NO: 7)

[0037] 5'-TTTTCTGCAGCTAACATTGAGATTCCCGAGATTTAGATCTTCTGCGACG-3'.

[0038] PCR reaction procedure such as Figure 9 shown.

[0039] The conversion conditions are as follows:

[0040] 4℃, 3...

Embodiment 2

[0045] Example 2: Construction of the C-terminal truncated HBV core protein eukaryotic expression plasmid pHBc171 for the target sequence HBc-2

[0046] Using the pHBc185 prepared in Example 1 as a template, the carrier fragment pHBCTD was generated by PCR, and the amplification primers were as follows:

[0047] SP / pHBc185 / 1502-1401 (SEQ ID NO: 8)

[0048] 5'-TCGGGAATCTCAATGTTAGCTGC-3',

[0049] ASP / pHBc185 / 1502-1401 (SEQ ID NO: 9)

[0050] 5'-TAGTTTCCGGAAGTGTTGATAAGATAGGGGCATTTG-3',

[0051] A DNA insert fragment encoding the 141-171 amino acids at the C-terminus of the HBV core protein was synthesized, and the sequence was as follows (SEQ ID NO: 10):

[0052] 5'-ACACTTCCGGAAACTACTGTTGTTAGACGACGGGACCGAGGCAGGCAATCTCGGGAATCTCAATGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGTCTCAA-3'.

[0053] Using homologous recombination technology, the synthetic fragment was inserted into the above-mentioned carrier fragment pHBCTD produced by PCR, and transformed into E.coli recipient bacteria ...

Embodiment 3

[0061] Example 3: Construction of the C-terminal truncated HBV core protein eukaryotic expression plasmid pHBc163 for the target sequence HBc-3

[0062] A DNA insert fragment encoding the 141-163 amino acids at the C-terminus of the HBV core protein was synthesized, and the sequence was as follows (SEQ ID NO: 11):

[0063] 5’-ACACTTCCGGAAACTACTGTTGTTAGACGACGGGACCGAGGCAGGCAATCTCGGGAATCTCAATGTCCCCTAGAAGAAGAACTCCC-3’

[0064] Using homologous recombination technology, the synthetic fragment was inserted into the above-mentioned carrier fragment pHBCTD produced by PCR, and transformed into E.coli recipient bacteria (same as Example 1). After screening and identification, the C-terminal truncated core protein eukaryotic was obtained. Expression plasmid pHBc163.

[0065] The PCR reaction procedure was the same as in Example 2.

[0066] The homologous recombination reaction conditions were the same as in Example 2.

[0067] Transformation conditions are the same as in Example 1. ...

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Abstract

The invention relates to a screening method for anti-HBV compounds. In the method, the anti-HBV compounds are screened by using an HBV core protein C-terminal amino acid sequence as a drug target site, wherein the HBV core protein C-terminal amino acid sequence at least comprises STLPETTVVRRRDRGR. The method for screening compounds provided by the invention can be used for screening and finding anti-HBV replication active compounds capable of inducing abnormal package of HBV core particles and for detecting activity of novel antivirus drugs for treating B-type viral hepatitis, wherein the novel antivirus drugs are aiming at the target sites and are obtained by other methods.

Description

technical field [0001] The invention belongs to the technical field of molecular biology and biomedicine, in particular, the invention relates to a drug screening method using the C-terminal amino acid sequence of the hepatitis B virus (HBV) core protein as the drug action target site. Background technique [0002] Chronic hepatitis B infection is a global infectious disease that seriously endangers human health. In China, liver disease caused by hepatitis B virus ranks among the top ten causes of death in the country, seriously affecting people's normal work and life. Currently, the small-molecule anti-HBV drugs on the market are mainly nucleoside drugs, such as lamivudine and entecavir. Viral drugs have a single target (HBV DNA polymerase), and there are problems such as drug-resistant mutations that exist after long-term use. Therefore, it is an important and urgent task to find new targets that are different from the mechanism of action of nucleoside anti-HBV drugs, an...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/02G01N33/68G01N33/569
CPCC12Q1/18C12Q1/68C12Q1/70C12Q1/02G01N33/569C12N15/63G01N33/68G01N33/5761
Inventor 左建平南发俊杨莉童贤昆张仰明王桂凤唐炜
Owner SHANGHAI INST OF MATERIA MEDICA CHINESE ACAD OF SCI