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Multiplex fluorescence melting curve based PCR detection method

A technology of melting curve and detection method, applied in the field of polymerase chain reaction (PCR), which can solve the problems that dyes do not have specific sequence recognition ability, real-time fluorescence quantitative PCR multiple detection ability limitation, fluorescence discrimination is limited, etc.

Active Publication Date: 2016-12-07
奥健生物科技(广州)有限公司
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AI Technical Summary

Problems solved by technology

However, based on TaqMan TM The disadvantage of the real-time fluorescent quantitative PCR detection method of the hydrolysis probe is that one color of the fluorescent group can only label one TaqMan TM Hydrolysis probe, detects one gene of interest, therefore, has limited multiplexing capability
However, because the fluorophore itself does not emit fluorescence of a single wavelength, and the PCR instrument has a limited degree of discrimination of the fluorescence emitted by different fluorophores, therefore, the existing PCR instrument can only detect the fluorescence emitted by 4 to 6 fluorophores. signal, which also enables the application of TaqMan TM The multiplex capability of real-time PCR with hydrolysis probes is limited
For real-time fluorescent quantitative PCR using double-stranded DNA fluorescent dyes, only one double-stranded DNA fluorescent dye can be used in the same reaction system because the dye does not have the ability to recognize specific sequences.

Method used

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  • Multiplex fluorescence melting curve based PCR detection method
  • Multiplex fluorescence melting curve based PCR detection method
  • Multiplex fluorescence melting curve based PCR detection method

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Embodiment Construction

[0044] The present invention will be further described in conjunction with the following examples and accompanying drawings.

[0045] This embodiment illustrates the detection method of the present invention through multiple detection of the FemA gene of Staphylococcus aureus, the Hly gene of Listeria monocytogenes, the IpaH gene of Shigella and the InvA gene of Salmonella.

[0046] 1 , the design of target gene-specific primer sequences and probe sequences:

[0047] 1) 从GeneBank中调出金黄色葡萄球菌常见株的FemA基因序列十三条:DQ352463,DQ352462,DQ352461,DQ352460,DQ352459,DQ352458,DQ352457,DQ352456,DQ352467,DQ352466,DQ352465,DQ352464,DQ352455,应用ClustalW软件 Perform sequence comparison, select a highly conserved segment as the target for primer design, then input the sequence into GeneBank, and perform BLAST comparison to determine that the sequence has low homology with other species genes except Staphylococcus aureus, and then Use ABI primer Express 3.0 software to design the primer sequence and pro...

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Abstract

The invention relates to the technical field of polymerase chain reaction (PCR), and in particular relates to a multiplex fluorescence melting curve based PCR detection method. According to the detection method, a bar code probe capable of specifically hybridizing with to-be-detected target genes and a fluorescence detection probe capable of specifically binding with the bar code probe are adopted for simultaneously detecting the plurality of target genes in a to-be-detected sample, in the DNA amplification process, a specific bar code sequence corresponding to each to-be-detected target gene is generated, then the bar code sequence is subjected to DNA amplification, so that specific DNA products labeled with different fluorescent groups and quenching groups and having different lengths are formed, and through the final multiplex fluorescence melting curve analysis, the PCR multiple detection based on the melting curve analysis is realized.

Description

technical field [0001] The invention relates to polymerase chain reaction (PCR), in particular to a multicolor fluorescent melting curve PCR detection method. Background technique [0002] Polymerase chain reaction (PCR) is a technology that uses heat-resistant DNA polymerase to amplify genes in vitro, and is widely used in many fields such as gene cloning / disease diagnosis / forensic identification. Ordinary PCR technology requires electrophoresis analysis of the product after amplification, and the analysis process is cumbersome and time-consuming. With TaqMan TM With the invention of hydrolysis probes and the use of double-stranded DNA fluorescent dyes, PCR products can be analyzed and detected by real-time fluorescence methods. This new PCR technology is called real-time fluorescent quantitative PCR. Compared with ordinary PCR technology, real-time fluorescent quantitative PCR has obvious advantages. The DNA amplification and result detection of real-time fluorescent qua...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
Inventor 杜正平熊槐
Owner 奥健生物科技(广州)有限公司
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