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Specific primer and detection method of macaca thibetana mitochondria D-loop region and application

A detection method and mitochondrial technology, which are applied in biochemical equipment and methods, microbial determination/inspection, recombinant DNA technology, etc., can solve the problem of cumbersome process, inability to comprehensively evaluate the genetic diversity of Tibetan monkey population, primers and detection methods. Obtain the D-loop sequence and other problems to achieve the effect of fast and accurate process and good specificity

Inactive Publication Date: 2018-03-30
四川省医学科学院四川省人民医院实验动物研究所
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Problems solved by technology

[0004] In view of the above-mentioned deficiencies in the prior art, the present invention provides a specific primer and detection method and application of the mitochondrial D-loop region of the Tibetan chief monkey, which can effectively solve the problem that the primers and detection methods designed in the prior art cannot obtain complete D-loop sequence, in order to obtain a complete D-loop sequence, it is necessary to connect the cloning vector and then perform sequencing. The process is cumbersome and the genetic diversity of the Tibetan monkey population cannot be fully evaluated by using part of the D-loop sequence. question

Method used

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  • Specific primer and detection method of macaca thibetana mitochondria D-loop region and application
  • Specific primer and detection method of macaca thibetana mitochondria D-loop region and application

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Embodiment 1

[0025] 1. Extraction of Tibetan monkey genome DNA

[0026] Using EDTA anticoagulant tubes to collect 2 mL of venous blood from Tibetan monkeys, and then use the blood genome DNA extraction kit to extract the genomic DNA in the blood of Tibetan monkeys. The purity and purity of genomic DNA were detected by 1.2% agarose gel electrophoresis and ultraviolet spectrophotometry. concentration.

[0027] 2. Design primers

[0028] Specific primers were designed in the conserved region CYTB gene and 12s ribosomal RNA region upstream and downstream of the mitochondrial D-loop control region in Tibetan monkeys. The primer sequences are:

[0029] F: 5'-CACTAGTCTCCCTAATCGAAAACAACCTACTC-3';

[0030] R: 5'-GTGCGTGCTTGATGCTTGCTCCTCTTG-3'.

[0031] 3. PCR amplification

[0032] Amplification system: Genomic DNA 2μL (50ng), 10×PCR buffer 5μL, 1.5mM Mg 2+ 2 μL, 2.5 μL of 1U / μL Taq enzyme, 5 μL of 0.2 mM dNTPs, 1 μL of 10 mM forward and reverse primers, add ddH 2 0 to 50 μL;

[0033] The am...

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Abstract

The invention discloses a specific primer and a detection method of macaca thibetana mitochondria D-loop region and application. Primer sequences are shown as SEQ ID No: 1 and SEQ ID No: 2. When the primer is used for PCR amplification, an amplification system is as follows: 2[mu]L of genomic DNA, 5[mu]L of 10*PCR buffer solution, 2[mu]L of Mg<2+> with the concentration of 1.5mM, 2.5[mu]L of Taq enzyme with the concentration of 1U / MuL, 5[mu]L of dNTPs with the concentration of 0.2mM, 1[mu]L of positive and negative primers with the concentration of 10mM respectively and the balance of ddH2O, altogether 50[mu]L; amplification procedures are as follows: predenaturing for 5min at 94 DEG C; denaturing for 30s at 94 DEG C, annealing for 30s at 60 DEG C, stretching for 90s at 72 DEG C, altogether 30 cycles, and finally stretching for 8min at 72 DEG C. The invention designs the specific primer for amplifying a full-length sequence of the macaca thibetana mitochondria D-loop region; a completeD-loop sequence can be rapidly and accurately amplified.

Description

technical field [0001] The invention belongs to the technical field of genetic analysis of Tibetan chief monkeys, and in particular relates to a specific primer, a detection method and an application of the mitochondrial D-loop region of Tibetan chief monkeys. Background technique [0002] Tibetan monkey (Macaca thibetana), also known as Daqing monkey and Tibetan monkey, belongs to the genus Macaca of the family Cercopithecidae (Primates) and is a unique non-human primate species in my country. Sichuan, Guizhou, Anhui, Fujian and Zhejiang in the northern subtropical zone. The Tibetan monkey belongs to the national second-class protected wild animals. It is listed as an appendix 2 species by the Convention on International Trade in Endangered Wild Fauna and Flora (CITES), and is listed as a "near-threatened" species in the Red List of Threatened Species by the International Union for Conservation of Nature (IUCN). Due to human disturbance in recent years, the number of wild T...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6888C12N15/11
CPCC12Q1/6888C12Q2600/156
Inventor 张新尚牛丽红周亮杨帆吴爱明付国强陈辉曾代文
Owner 四川省医学科学院四川省人民医院实验动物研究所
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