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Fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower, primer and application thereof

A technology of fluorescence quantification and internal reference gene, which is applied in the field of plant molecular biology, can solve the problems affecting the accuracy and instability of the target gene, and achieve the effects of strong primer specificity, improved reliability, and improved detection efficiency

Inactive Publication Date: 2019-01-15
NANJING FORESTRY UNIV
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Problems solved by technology

The research on the molecular mechanism of Changshan fruit in Haizhou has not been reported yet. According to research, there is no internal reference gene that is constantly expressed under all experimental conditions. The commonly used internal reference genes will show unstable traits under different plants and experimental conditions, thus Affects the accuracy of target gene detection, so to develop good genes in Changshan, Haizhou, it is necessary to determine stable and reliable internal reference genes

Method used

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  • Fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower, primer and application thereof
  • Fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower, primer and application thereof
  • Fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower, primer and application thereof

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Embodiment 1

[0028] 1. Plant tissue total RNA extraction and cDNA synthesis

[0029] Extract total RNA with EASYspin Plus Plant RNA Extraction Kit (Adley Biotechnology Co., Ltd.), use a spectrophotometer (METTLER TOLEDO, Switzerland) to detect RNA concentration and quality, and utilize 1.5% agarose gel electrophoresis to detect the total complete RNA. sex. Using Beijing Quanshijin Reverse Transcription Kit (Quanshijin Biotechnology Co., Ltd.), RNA was purified and the first strand of cDNA was synthesized according to the instructions.

[0030] 2. Selection of internal reference genes and design of primers

[0031] Query the main internal reference genes in other plants according to the literature, and finally design 17 internal reference genes required for the experiment, which are Actin (SEQ ID NO.1), PP2A (SEQ ID NO.2), RPL (SEQ ID NO.3 ), PK (SEQ ID NO.4), 18S (SEQ ID NO.5), RAN (SEQ ID NO.6), APT (SEQ ID NO.7), SAND (SEQ ID NO.8), PROF (SEQ ID NO. NO.9), MDH (SEQ ID NO.10), EF-1A (S...

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Abstract

A fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower, its primer and the application thereof are disclosed, wherein the internal reference gene is Actin and AP-2 gene, wherein the gene sequence of the Actin gene is as shown in SEQ ID NO: 1, AP-2 gene is shown in SEQ ID NO: 13. The present application screens out candidate genes with relatively stable expressionaccording to the genes disclosed in the prior art, its stability is evaluated by software, A fluorescence quantitative internal reference gene suitable for Haizhou Changshan flower was obtained, Based on these genes, real-time fluorescence quantitative PCR primers were designed, which filled the situation that there were no internal reference genes in different flowering stages of Haizhou Changshan from different provenances, and provided a powerful support for accurate quantification of related functional genes in different flowering stages of Haizhou Changshan from different provenances, and could improve the stability, repeatability and reliability of the research.

Description

technical field [0001] The invention belongs to the field of plant molecular biology, and specifically relates to an internal reference gene suitable for fluorescence quantification of Haizhou Changshan flower, its primer and application. technical background [0002] Haizhou Changshan (Clerodendrum trichotomum Thunb.), also known as stinky phoenix tree, is a deciduous shrub or small tree of Verbenaceae (Verbenaceae) Daqing genus (Clerodendmm L.). . The drupe is spherical, blue-purple when ripe, shiny, enclosed in the perennial calyx, and does not fall for a long time in autumn and winter. It is a good fruit tree species in autumn and winter, and a rare ornamental tree that combines flower and fruit. The research on the molecular mechanism of Changshan fruit in Haizhou has not been reported yet. According to research, there is no internal reference gene that is constantly expressed under all experimental conditions. The commonly used internal reference genes will show unsta...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6895C12N15/11
CPCC12Q1/686C12Q1/6895C12Q2600/166C12Q2563/107C12Q2545/114
Inventor 华雅洁杨秀莲施婷婷岳远征顾恒王良桂
Owner NANJING FORESTRY UNIV
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