Method for increasing content of carotenoid in patinopecten yessoensis
A technology of carotene and scallop, which is applied in DNA/RNA fragments, animal husbandry, recombinant DNA technology, etc., and can solve the problems of decreased expression level and reduced degradation efficiency of carotenoids
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Embodiment 1
[0016] Embodiment 1: screening protease
[0017] Through genome-wide linkage analysis, association analysis, expression profile analysis and other multi-omic studies, the applicant found that the expression of carotenoid oxidative lyase gene is down-regulated, which reduces the degradation efficiency of carotenoids. The reason for the red.
[0018] Finally, the target gene was obtained from the scallop genome and transcriptome database. The gene has a full length of 9107bp, a cDNA length of 2682bp, and a CDS length of 1566bp (SEQ ID NO: 2), encoding 521 amino acids (SEQ ID NO: 1), predicted The molecular weight of the protein is 59.2KDa, the isoelectric point is 6.54; the length of 5'UTR is 510bp, and the length of 3'UTR is 609bp.
[0019] By injecting dsRNA, the gene expression is interfered with. qRT-PCR was used to detect the effect of interference. By observing the color change of adductor muscle and HPLC analysis, it was proved that carotenoids accumulated in the muscle...
Embodiment 2
[0021] Embodiment 2: Improve the content of carotenoids in Ezo scallop by RNAi interference
[0022] The RNA interference of the gene of the present invention comprises the following steps:
[0023] a) primer design;
[0024] b) preparation of RNAi template;
[0025] c) in vitro transcription and synthesis of dsRNA;
[0026] d) Injecting dsRNA to interfere with the expression of the target gene;
[0027] e) qRT-PCR detection interference effect;
[0028] f) HPLC detection of carotenoid content.
[0029] The specific operation is as follows:
[0030] a) Primer design. The RNAi target sequences of genes were predicted and screened using siDirect version 2.0 (http: / / sidirect2.rnai.jp / ). According to the basic principles of RNAi primer design, corresponding primers were designed for the target sequence, and a T7 promoter was introduced at the 5' end of each primer. The primer sequence was:
[0031] 5'-TAATACGACTCACTATAGGGCTCCCTTCGATGTAGCTGAAAAATT-3';
[0032] 5'-TAATACGAC...
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