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Nucleic acid for inhibiting thermostable polymerase and application thereof

A heat-stable polymerase technology, applied in the direction of enzymes, transferases, enzymes, etc., can solve the problems of increased reaction uncertainty, modification uncertainty, antibody activity difference, etc., to achieve obvious activity blocking effect, mild modification process, The effect of good hot start

Inactive Publication Date: 2021-03-12
GUANGDONG FAPON BIOTECH CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, because the animals themselves are exposed to other antigens in the environment during the breeding process, a certain amount of non-target antibodies will be produced, resulting in low purity of the purified antibodies; and the quality of the antibodies is also related to the health status of the animals themselves. The state will also affect the activity of the final antibody
In addition, the cell line itself will degenerate during passage and storage, which will also lead to a decrease in the activity of the antibody itself, and there are differences in antibody activity between batches, resulting in activity differences between batches of abzymes
Chemical modification of Taq DNA polymerase also has certain disadvantages: the chemical group achieves the purpose of modification by reacting with the amino acid residues in the Taq enzyme, but since the same protein contains more than one amino acid residue of the same type, and the amino acid residues The position of the base may be on the surface of the protein or inside it, leading to uncertainty in the modification
At the same time, due to the fast rate of the chemical reaction itself, it is difficult to control the entire modification process, and the chemical reaction is often accompanied by the generation of by-products, which also increases the uncertainty of the reaction.

Method used

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  • Nucleic acid for inhibiting thermostable polymerase and application thereof
  • Nucleic acid for inhibiting thermostable polymerase and application thereof
  • Nucleic acid for inhibiting thermostable polymerase and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0093] Embodiment 1, inhibit the nucleic acid of thermostable polymerase

[0094] The inventor designed a series of single-stranded nucleic acids, and after multiple rounds of screening and testing, the nucleic acid with the sequence shown in SEQ NO:1 was obtained. The sealing performance at different temperatures was tested to perform the function of binding and inhibiting thermostable polymerase. The test method: using nucleic acid The modified Taq enzyme (refer to Example 2) was used to prepare a PCR system, using human genomic DNA as a template, and performing heat treatment at 35 / 40 / 45 / 50 / 55°C before performing the PCR reaction, and then proceeding to a normal PCR amplification reaction Finally, the number and brightness of non-specific bands were analyzed by agarose electrophoresis to judge the blocking effect of the nucleic acid aptamer on the Taq enzyme. Such as figure 1 As shown in the figure, it can be seen from the figure that the nucleic acid modified Taq enzyme h...

Embodiment 2

[0096] Embodiment 2, the preparation of nucleic acid modification enzyme

[0097] The nucleic acid provided in Example 1 is subjected to gradient annealing, the annealing condition is annealing from 95°C to 4°C, 1 round of annealing every 8-10°C, and each round is treated for 1-2 min; to make it fold correctly into a stem-loop structure. Mix DNA polymerase (such as Taq enzyme) with the above-mentioned folded nucleic acid, put it in a 5ml nut tube, place it on a plasma mixer, set the rotation speed at 50rpm, and mix and modify it for 8 hours at 10°C to obtain Nucleic acid modifying enzymes.

[0098] Purify the nucleic acid modifying enzyme with a Mono Q column, separate the unmodified nucleic acid, and collect the enzyme that has completely modified the nucleic acid; concentrate the modified nucleic acid modifying enzyme so that the protein concentration is greater than or equal to the protein concentration before modification , optional surfactants (such as Tween 20) and cryo...

Embodiment 3

[0099] Embodiment 3, detection of enzymatic sealing performance

[0100] Prepare a PCR reaction system with different nucleic acid-modified Taq enzymes, use human genomic DNA as a template, set non-specific amplification conditions for PCR amplification, and finally use agarose electrophoresis to compare the number of non-specific bands to determine the suitability of the aptamer Blocking effect of Taq enzyme.

[0101] 1. Enzyme Activity Sealed Detection System Preparation

[0102] Detection primers:

[0103] Forward primer: 5'-ACGCCTCCGACCAGTGTTT-3';

[0104] Reverse primer: 5'-ACGCCTCCGACCAGTGTTT-3'.

[0105] Enzyme activity closed detection system:

[0106]

[0107] The nucleic acid modification Taq enzymes in the table are prepared by using the nucleic acids shown in SEQ ID NO: 1-12 according to the method in Example 2.

[0108] The nucleic acid of the control nucleic acid modification Taq enzyme (1#, 2#) is:

[0109] 1#: 5'-CGATCATCTCAGAACATTCTTAGCGTTTTGTTCTTGTGT...

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Abstract

The invention provides nucleic acid and an application thereof, and relates to the technical field of biology, the nucleic acid provided by the invention can inhibit the activity of thermostable polymerase at normal temperature, and meanwhile, the nucleic acid has thermal startability, so that the generation of primer dimers or non-specific products at the initial stage of PCR reaction can be effectively controlled. The nucleic acid is not inactivated or degraded in the reaction process, can be folded again in the renaturation process, and is recombined to the thermostable polymerase to seal the activity of the thermostable polymerase, thereby ensuring sufficient activity of the thermostable polymerase in the system. In addition, the operation of preparing the nucleic acid modification enzyme is simple, the consumed time is short, and the batch-to-batch stability is high.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a nucleic acid for inhibiting thermostable polymerase and its application. Background technique [0002] DNA polymerase is responsible for the replication and maintenance of the genome, a central responsibility for the precise transmission of genetic information between generations. In vitro, DNA replication can be repeated many times, for example during the polymerase chain reaction. In initial studies, DNA polymerase was added at the beginning of each round of DNA replication; later, it was confirmed that thermostable DNA polymerases were available from bacteria grown at high temperatures, and that these enzymes only needed to be added once. These enzymes were not irreversibly inactivated at the high temperature of PCR. Thus, repeated cycles of the polymerase chain reaction can be performed without the need to add fresh enzyme at the beginning of each synthetic addition process. ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/11C12N9/12
CPCC12N9/1252C12N15/11C12Y207/07007
Inventor 蔡统聪范凌云孟媛卢庆庆林钰琼
Owner GUANGDONG FAPON BIOTECH CO LTD
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