Wheat TaB3-like-A gene and application thereof
A tab3-like-a, wheat technology, applied in the fields of application, genetic engineering, plant genetic improvement, etc., can solve the problems of unclear biological functions and molecular mechanisms, and achieve the effect of reducing plant height
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Embodiment 1
[0095] Embodiment 1: Genotyping of TaB3-like-A gene in core germplasm material
[0096] 1. Select wheat micro-core germplasm materials (105 bred varieties and 157 local varieties) distributed in different wheat regions in my country as excavation materials for polymorphic SNP sites.
[0097] 2. Exon capture to obtain SNPs of micro-core germplasm materials
[0098] The Roche exon capture kit (SeqCap Pure Capture Bead Kit, 06977952001, Roche) was used to perform library construction and sequencing on the DNA of 262 materials. For specific methods, please refer to the kit instruction manual.
[0099] 3. The whole genome sequence comparison was carried out by BWA software, the variation detection and genotyping were carried out by GATK software, and the genotype of the gene in 262 materials was obtained.
Embodiment 2
[0100] Example 2: Association analysis of TaB3-like-A gene SNP loci and plant height traits
[0101] Using the plant height phenotype data of 262 micro-core germplasm materials for three years and three points (in Luoyang, Henan in 2002, in Luoyang, Henan in 2005, in Beijing in 2006), association analysis was carried out. The correlation results between TaB3-like-A gene and plant height are shown in Table 1. It can be seen that the TaB3-like-A gene is significantly correlated with the SNP loci of wheat material plant height traits.
[0102] Table 1 SNP sites significantly associated with plant height
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Embodiment 3
[0105] Embodiment 3: the sequence of wheat TaB3-like-A gene
[0106] According to the TraesCS1A02G302700 gene number, compare it on the wheat genome database website, obtain its homologous gene numbers TraesCS1B02G312900 and TraesCS1D02G302100, and obtain the gene sequences of the TaB3-like gene on the A, B, and D homologous chromosomes, as shown in SEQ ID NO.1- 3, the gene is located on the homologous group of the first chromosome.
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