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A SNP marker related to salt tolerance of tilapia and its application

A tilapia and salt-tolerant technology, which can be applied in climate change adaptation, recombinant DNA technology, microbial measurement/inspection, etc., can solve the problems of low selection rate and long cycle, and achieve good specificity, great scientific value and commercial value. The effect of high value and amplification efficiency

Active Publication Date: 2022-06-07
PEARL RIVER FISHERY RES INST CHINESE ACAD OF FISHERY SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] There are problems such as low selection rate and long cycle in the selection of salt-tolerant tilapia by traditional breeding methods

Method used

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  • A SNP marker related to salt tolerance of tilapia and its application
  • A SNP marker related to salt tolerance of tilapia and its application
  • A SNP marker related to salt tolerance of tilapia and its application

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0037] Research on the effect of the SNP marker of the present invention:

[0038]The Oreochromis hornorum (500 tails) used in the present invention all come from the Gaoyao Aquatic Germplasm Base of the Pearl River Fisheries Research Institute of the Chinese Academy of Fishery Sciences. The salinity stress experiment was carried out in a fish pond of 320cm×200cm×150cm. Before the experiment, the cells were incubated for 7 days, during which the dissolved oxygen was 8.7±0.6mg / L, the water temperature was 28.5±1℃, and the pH value was 8.4±0.5. Select healthy, harmless and lively tilapia for the experiment. After the experiment starts, add pre-prepared salt water of about 113‰ every 30 minutes to increase the salinity of the pool water, and increase the salinity by 5‰ each time. Use a hand-held salinity meter Check the actual salinity of the pool water. During the period of continuous aeration, no feed was fed. After 2 hours, tilapia began to die, and the death time, water sa...

Embodiment 2

[0044] The present embodiment screens / detects the SNP markers of tilapia:

[0045] (1) Extraction of sample DNA

[0046] (1) Take 3 mg of tilapia fin ray tissue of the sample to be tested, cut into pieces, add 0.5 mL of lysis solution (10 mmol / LTris-HCl; 0.1 mol / L EDTA; 0.5% SDS; 30 mg / L RNase; 100 mg / L) L proteinase K, pH 8.0), digested at 55°C for 1 hour;

[0047] (2) Add an equal volume of phenol / chloroform / isoamyl alcohol (volume ratio 25:24:1) mixture, mix well, stand at room temperature for 5 minutes, centrifuge at 12,000 rpm for 10 minutes, take the supernatant, and then Extract once with chloroform, stand at room temperature for 5 minutes, centrifuge at 12,000 rpm for 10 minutes, and take the supernatant;

[0048] (3) adding 2 times the volume of absolute ethanol, standing at room temperature for 10 minutes to precipitate DNA, and centrifuging at 12,000 rpm for 10 minutes to obtain a precipitate;

[0049] (4) Wash the precipitate once with 70% ethanol, centrifuge at...

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Abstract

The invention belongs to the technical field of aquatic organisms, and discloses a SNP marker related to the salt tolerance trait of tilapia and an application thereof. The sequence of the SNP marker is shown as SEQ ID NO: 1 or SEQ ID NO: 4, and the base of the SNP site at 2942 bp of the SEQ ID NO: 1 sequence or at 99 bp of the SEQ ID NO: 4 sequence is G or T. The present invention creatively provides a SNP marker related to the salt-tolerant traits of tilapia. On this basis, the SNP marker can be used to screen or detect tilapia salt-tolerant individuals without being limited by growth stages. Greatly improve the process of tilapia breeding and quickly select the germplasm of tilapia with excellent salt-tolerant traits, and develop corresponding detection primer pairs and kits on this basis, which can quickly determine the quality of tilapia to be tested Genotype has great scientific value and commercial value.

Description

technical field [0001] The invention belongs to the technical field of aquatic organisms, and in particular relates to a SNP marker related to the salt tolerance of tilapia and its application. Background technique [0002] Tilapia, native to Africa, commonly known as African crucian carp, belongs to a hygrosaline tropical fish belonging to the family Cichlidae of the order Perciformes. As an important economic fish, tilapia has the characteristics of fresh and tender meat, high nutritional value and fast growth. One, it has been cultivated in more than 100 countries and regions. my country is the world's largest producer and consumer of tilapia, with an output of 1.6417 million tons in 2019, accounting for about 60% of the world's tilapia production, mainly including Mozambique tilapia, Nile tilapia, and tilapia. For cultured species such as tilapia and hybrids, the salt tolerance of different cultured species varies greatly. [0003] The scarcity of global water resource...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6888C12N15/11
CPCC12Q1/6888C12Q2600/156C12Q2600/124Y02A40/81
Inventor 朱华平马冬梅樊佳佳苏换换
Owner PEARL RIVER FISHERY RES INST CHINESE ACAD OF FISHERY SCI