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Method for preparing internal reference reagent (InMarker) fluorescent marking DNA molecular weight

A fluorescent labeling and molecular weight technology, applied in the field of genetic analyzers, can solve problems such as inability to apply, limited application scope, and unsuitability for mass production, avoiding differences in template quality, scientifically accurate calculation and identification, and easy qualitative and quantitative determination. Effect

Inactive Publication Date: 2005-07-20
上海申友生物技术有限责任公司
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AI Technical Summary

Problems solved by technology

At present, the DNA molecular weight reference standards used in China are basically obtained by enzymatic digestion. Although the fragment size is also very accurate, they can generally only be used as DNA molecular weight external reference standards. The molecular weight reference standard (marker) reagents used in China are insufficient. Advantages: First, most of them are molecular weight external reference standards, that is, the sample and the molecular weight reference standard are not on the same lane during electrophoresis. Due to the difference in electrophoresis conditions, system errors will be caused
The second is to mass-produce, it is necessary to frequently select and prepare templates that can represent all allele fragments, not only the workload is heavy, but also the purity and content of the same template used each time vary, making it difficult to amplify standardization
The third is to use human genomic DNA as a template, which has a large molecular weight and an extremely complex structure, and is prone to non-specific amplification during amplification, which is not suitable for mass production
Fourth, these reagents are non-fluorescent, and need to add additional dyes. They cannot be used for fluorescence detection, and their sensitivity is low. They can only be applied to ordinary electrophoresis, but not to fluorescence detection instruments such as genetic analyzers. The scope of application is limited.

Method used

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Examples

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Embodiment Construction

[0030] The specific steps of the preparation method of fluorescently labeled DNA molecular internal reference reagent:

[0031] According to the molecular weight reference standards published at home and abroad, design and synthesize a 100bp template;

[0032] According to the template design and synthesis of fluorescent primers and common primers, the fluorescent primer is CAG CCA CAATGA CAG CAG CTA, and the non-fluorescent primer is CGA CTC ACT ATA GGG AAA GCT GGTGGTA;

[0033] Perform PCR reaction according to the following procedure

[0034] 95℃10min 94℃30s 63℃30s 72℃60s 60℃45min

[0035] ------40cycles----

[0036] Use the TAKARA T-Vector vector kit to connect the PCR product to the vector, transform the vector containing the DNA fragment into Escherichia coli, and culture overnight, that is, PMD18-T vector 0.015pm, ligation solution 12.5ul, purified PCR product 0.075 pm, overnight at 4°C, take 5ul and transform it into DH5α competent 100ul, ...

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Abstract

The invention discloses a method for preparing in marker of fluorescence labeled DNA molecular weight, establishing a template to synthesize the needed fluorescence primer for making PCR reaction, obtaining plasmid of genes of different fragment sizes, preparing amplified product, using fluorescence for detecting, obtaining the in marker of fluorescence labeled DNA molecular weight. The established template of the invention is convenient to identify and the prepared in marker contains special enhance fragments. The manufacturing flow is simple and convenient, short-cycle, simple-operated, and low cost, economical and practical, and suitable for batch-type production.

Description

technical field [0001] The invention relates to genetic engineering, genomics and molecular biology. It applies genetic engineering methods and can provide a reagent for determining the size of DNA fragments, which is not only suitable for ordinary gel electrophoresis, but also suitable for genetic analyzers. This technology can be applied to gene analysis, gene diagnosis and individual identification in the fields of molecular biology, genetics, anthropology, forensic evidence biology and other disciplines. Background technique [0002] The Human Genome Project aims to elucidate the sequence of 3 billion base pairs of the human genome, discover all human genes and find out their positions on chromosomes, and decipher all human genetic information. Studies have found that many traits and diseases of individual organisms are determined by the control of multiple genes, that is, polygenic systems. The study of these traits and lesions should not only focus on the effect of a ...

Claims

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Application Information

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IPC IPC(8): G01N21/64G01N21/76
Inventor 陈光辉
Owner 上海申友生物技术有限责任公司
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