Reverse transcription loop-mediated isothermal amplification kit for swine epidemic encephalitis B virus and application of kit

A Japanese encephalitis virus, ring-mediated isothermal technology, applied in the field of microbial detection, can solve the problems of expensive equipment, time-consuming, difficult virus, etc., and achieve the effect of simple operation, simple interpretation method, and rapid acquisition

Inactive Publication Date: 2016-02-17
GUANGXI VETERINARY RES INST
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] The purpose of the present invention is to provide a simple, quick and accurate kit for detecting porcine encephalitis Japanese encephalitis virus at the grassroots level in order to solve the problems of difficult, time-consuming and expensive instruments for detecting porcine encephalitis Japanese encephalitis virus at the grassroots level. The technical scheme used for realizing the object of the present invention is: a kind of kit of porcine epidemic Japanese encephalitis virus reverse transcription loop-mediated isothermal amplification, which kit includes RT-LAMP primers, 2× reaction buffer, EM, fluorescent Visual detection reagent, ultrapure water and Japanese encephalitis virus RNA template; the RT-LAMP primers include outer primer F3 (SEQ ID NO: 1) and B3 (SEQ ID NO: 2), inner primer FIP (SEQ ID NO: 3) with BIP (SEQ ID NO: 4) and loop primer LF (SEQ ID NO: 5) with LB (SEQ ID NO: 6):

Method used

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  • Reverse transcription loop-mediated isothermal amplification kit for swine epidemic encephalitis B virus and application of kit
  • Reverse transcription loop-mediated isothermal amplification kit for swine epidemic encephalitis B virus and application of kit
  • Reverse transcription loop-mediated isothermal amplification kit for swine epidemic encephalitis B virus and application of kit

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Effect test

Embodiment 1

[0083] The specificity result of embodiment 1RT-LAMP detection method

[0084] RT-LAMP amplification was carried out on 1 strain of porcine epidemic Japanese encephalitis virus, 7 strains of control virus and water control, and the results were as follows figure 1 As shown, the porcine epidemic Japanese encephalitis virus reaction tube showed a rising curve of turbidity in about 11 minutes, which was a positive result, and the 7 strain control virus reaction tubes and the water control reaction tube had no amplification, which was a negative result.

Embodiment 2

[0085] The sensitivity result of embodiment 2RT-LAMP detection method

[0086] The initial concentration of porcine epidemic Japanese encephalitis virus genomic RNA was 1.27×10 2 ng / μL, after 10-fold serial dilution, RT-LAMP and common PCR amplification, the results are as follows figure 2 and image 3 As shown, the result shows that the detection limit of the RT-LAMP method of the present invention is about 1.27×10 -5 ng / μL, while the detection limit of common PCR method is 1.27×10 -3 ng / μL.

Embodiment 3

[0087] Fluorescence visualization detection results of embodiment 3 RT-LAMP detection method

[0088] According to the optimized conditions monitored by the turbidimeter, fluorescent dyes were added, reacted at 63°C for 60 minutes, and observed under ultraviolet light. Figure 4 To observe the results, the left tube is the reaction with porcine epidemic Japanese encephalitis virus RNA as the template, which is a positive result, and the right tube is a negative control, which is a negative result. The test results show that the established RT-LAMP method can be used conveniently at the grassroots level. You only need to use the kit with the RT-LAMP primers designed by this method. After adding the sample, use a cheap water bath to keep it at 63°C for 60 minutes, and you can quickly observe As a result, without opening the cap, contamination is avoided.

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Abstract

The invention discloses a visualized reverse transcription loop-mediated isothermal amplification kit for a swine epidemic encephalitis B virus and application of the kit. The kit comprises RT-LAMP primers, two reaction buffer solutions, an EM, a fluorescent visual detection reagent, ultrapure water and a swine epidemic encephalitis B virus RNA template; the RT-LAMP primers comprise the outer primers F3 and B3, the inner primers FIP and BIP and the loop primers LF and LB, and the application includes detection of a swine epidemic encephalitis B lesion tissue sample and toxic mosquitoes through the kit. Specificity detection and sensitivity detection prove that the reverse transcription loop-mediated isothermal amplification kit can monitor a reaction in real time and quantitatively detect out the copy number of the swine epidemic encephalitis B virus to quickly and accurately obtain a detection result, and convenience is brought to easy, convenient, quick and reliable detection of the swine epidemic encephalitis B virus.

Description

technical field [0001] The invention relates to the technical field of microbial detection, in particular to a fast, visualized and real-time quantitative detection of porcine epidemic Japanese encephalitis virus loop-mediated isothermal amplification kit and its application. Background technique [0002] Japanese encephalitis ( Japanese encephalitis, JE ) is an insect-borne zoonotic natural foci infectious disease caused by the Japanese encephalitis virus (JEV), which mainly damages the central nervous system. In temperate tropical regions, JEV is mainly transmitted through the mosquito-waterfowl or pig-waterfowl route all year round. At present, there are 3 billion people in the world living in JE endemic areas, which are mainly prevalent in the Far East and Southeast Asian countries and regions, mainly in Asia, and China, India and Southeast Asian regions are more prevalent. The prevalence of JE was first reported in Japan in the 1930s. In the summer of 1924, Japanese ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/68C12R1/93
CPCC12Q1/6844C12Q2531/119C12Q2563/107
Inventor 卢冰霞何颖秦毅斌赵武陈忠伟段群棚李斌周英宁梁家幸杨思仪蒋冬福苏乾莲
Owner GUANGXI VETERINARY RES INST
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