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Capillary Electrophoresis Method for Separating Complexes in Two Online Reactions and Reverse Screening

A technology of capillary electrophoresis and reverse screening, which is applied in the fields of biochemical equipment and methods, measurement/inspection of microorganisms, DNA preparation, etc. It can solve the problems of large amount of target molecules, cumbersome optimization of reaction conditions, time-consuming and labor-intensive reverse screening steps, etc. problems, to achieve the effect of eliminating incubation steps, improving the degree of separation, and avoiding cumbersome operations

Active Publication Date: 2020-12-08
BEIJING INSTITUTE OF TECHNOLOGYGY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

[0005] In view of the shortcomings of the traditional CE-SELEX technology for screening nucleic acid aptamers, the amount of target molecules used is large, the process of optimizing reaction conditions is cumbersome, and the reverse screening step is time-consuming and labor-intensive. and reverse screening methods, which can be used for high-efficiency screening of target molecules and nucleic acid aptamers

Method used

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  • Capillary Electrophoresis Method for Separating Complexes in Two Online Reactions and Reverse Screening
  • Capillary Electrophoresis Method for Separating Complexes in Two Online Reactions and Reverse Screening
  • Capillary Electrophoresis Method for Separating Complexes in Two Online Reactions and Reverse Screening

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Experimental program
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Effect test

Embodiment 1

[0034] (1) Dilute the original Apt29-FAM stock solution with pure water to obtain 1.0×10 -6 mol / L Apt29-FAM sample solution; the original H-Thr stock solution was diluted with pure water to obtain 1.0×10 -6 mol / L H-Thr sample solution.

[0035] In the Beckman P / ACE MDQ capillary electrophoresis instrument, separate complexes based on two online reactions of capillary electrophoresis: take 20 μL of H-Thr sample solution, first-stage electrophoresis buffer, second-stage electrophoresis buffer and Apt29-FAM sample Solution, the order of sample injection during electrophoresis operation is: the first reactant H-Thr sample solution with slow migration rate, the first segment of electrophoresis buffer, the second reactant H-Thr sample solution with slow migration rate, the second segment Electrophoresis buffer and the third reactant Apt29-FAM sample solution with fast migration rate, the injection conditions are as follows: H-Thr sample solution: 0.5psi, 10s, the first electrophore...

Embodiment 2

[0040] (1) Dilute the original Apt29-FAM stock solution with pure water to obtain 1.0×10 -8 mol / L Apt29-FAM sample solution; the original H-Thr stock solution was diluted with pure water to obtain 1.0×10 -6 mol / L H-Thr sample solution.

[0041] In the Beckman P / ACE MDQ capillary electrophoresis instrument, two online reactions based on capillary electrophoresis were used to separate the complex: take 20 μL of H-Thr sample solution, the first segment of electrophoresis buffer, the second segment of electrophoresis buffer and Apt29-FAM Sample solution, the order of sample injection during electrophoresis operation is: the first reactant H-Thr sample solution with slow migration rate, the first electrophoresis buffer, the second reactant H-Thr sample solution with slow migration rate, the second Section electrophoresis buffer solution and the third reactant Apt29-FAM sample solution with fast migration rate; the sampling conditions are as follows: the fixed Apt 29-FAM sample sol...

Embodiment 3

[0047] (1) Dilute the original Apt29-FAM complementary sequence stock solution with pure water to obtain 1.0×10 -6mol / L Apt29-FAM complementary sequence sample solution; dilute the original H-Thr stock solution with pure water to obtain 1.0×10 -6 mol / L H-Thr sample solution.

[0048] In the Beckman P / ACE MDQ capillary electrophoresis instrument, two online reactions based on capillary electrophoresis were used to separate the complex: take 20 μL of H-Thr sample solution, the first segment of electrophoresis buffer, the second segment of electrophoresis buffer and Apt29-FAM Complementary sequence sample solution, the order of sample injection during electrophoresis is: the first reactant H-Thr sample solution with slow migration rate, the first electrophoresis buffer, the second reactant H-Thr sample solution with slow migration rate, The second section of electrophoresis buffer and the third reactant Apt29-FAM complementary sequence sample solution with fast migration rate; t...

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Abstract

The invention relates to a compound separating and inverse screening method through capillary electrophoresis two-time on-line reaction, and belongs to the technical field of biological separation and analysis. The method includes the steps that reactants are subjected to capillary zone electrophoresis, the first reactant, a first-section electrophoretic buffer solution, the second reactant, a second-section reactant and the third reactant are injected as samples, subjected to on-line reaction and mixed to form the compound, then the compound passes through a window to be detected; the migration rate of the first reactant and the second reactant is small, the migration rate of the third reactant is large, and the reactants are protein and ssDNA; when the compound is separated, the first reactant and the second reactant are protein or ssDNA at the same time, and the third reactant is different from the first reactant and the second reactant; during inverse screening, ssDNA reacts with inverse screening protein first and then reacts with target protein to obtain ssDNA higher in target protein specificity. Two-time screen is achieved through one-time electrophoresis, and online inverse screening can be achieved according to difference of the target protein.

Description

technical field [0001] The invention relates to a capillary electrophoresis two-time on-line reaction separation compound and a reverse screening method, which belongs to the technical field of biological separation and analysis. Background technique [0002] Single-stranded oligonucleotide (single-stranded DNA, ssDNA) or RNA has a specific secondary structure, which can form high-affinity and specific complexes with protein molecules. The oligonucleotide library is a class containing 10 13 ~10 15 A ssDNA mixture of different bases, which may contain one or several ssDNAs that can bind to protein molecules (target molecules) with high specificity and high affinity, that is, nucleic acid aptamers (Aptamers). Nucleic acid aptamers are screened from random oligonucleotide libraries by exponential enrichment ligand system evolution (SELEX) technology, and have oligonucleotide sequence ligands with high affinity and high specificity for target molecules , which is characterize...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/10
CPCC12N15/101C12Q2525/205C12Q2565/125C12Q2565/629
Inventor 屈锋胡猷浩赵新颖
Owner BEIJING INSTITUTE OF TECHNOLOGYGY