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Quantitative detection method of bovine-derived and porcine-derived components based on droplet digital PCR (polymerase chain reaction) as well as primer, probe and kit

A quantitative detection, porcine-derived technology, applied in the field of molecular biology, can solve the problems of differences in amplification efficiency, deviation, and undetectable amplification of target DNA molecules, and achieve the effect of high sensitivity and specificity

Inactive Publication Date: 2017-05-17
珠海出入境检验检疫局检验检疫技术中心
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

This technology has the following problems: (1) The difference in the background between the calibrator and the sample will introduce bias and affect the efficiency and measurement response of PCR; (2) The target DNA molecules with low copy number may not be detected by amplification; (3) ) The PCR amplification efficiency of the sample may be different from that of the calibrator; (4) The impurities introduced into the DNA solution during DNA extraction or the degradation of DNA affect the dynamic PCR amplification process

Method used

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  • Quantitative detection method of bovine-derived and porcine-derived components based on droplet digital PCR (polymerase chain reaction) as well as primer, probe and kit
  • Quantitative detection method of bovine-derived and porcine-derived components based on droplet digital PCR (polymerase chain reaction) as well as primer, probe and kit
  • Quantitative detection method of bovine-derived and porcine-derived components based on droplet digital PCR (polymerase chain reaction) as well as primer, probe and kit

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0041] Validation of test method accuracy

[0042] 1. Instruments, reagents and test samples

[0043] Instruments: Bio-Rad QX200 micro-droplet digital PCR instrument, automatic nucleic acid extraction system, micro-spectrophotometer, ultra-fast refrigerated centrifuge.

[0044] Reagents: 2×Droplet PCR Supermix, Droplet generation oil (purchased from Bio-Rad Biotechnology Co., Ltd.).

[0045] Primers and probes were synthesized by Dalian Bao Biotechnology Co., Ltd., and the sequences are as follows:

[0046] Two primers for bovine-derived components

[0047] Bov-BGH-F: 5'-CCGATGGATGTGTTCAGAGCT-3';

[0048] Bov-BGH-R: 5'-GCCAAATGTCTGGGTGTAGATACC-3';

[0049] A probe Bov-BGH-Pr for detecting bovine-derived components: 5′-TGGGCTTTAGGGCTTCCGAATGTGAA-3′;

[0050] Two primers for detecting components of porcine origin

[0051] Sus-β-Actin-F: 5'-CGAGACCTTCAACACCCCAG-3';

[0052] Sus-β-Actin-R: 5'-GGCGTACCCCTCGTAGATG-3';

[0053] A probe Sus-β-Actin-Pr for detecting porcine-der...

Embodiment 2

[0067] Sensitivity test of test method

[0068] 1. Instruments and reagents

[0069] Instruments: Bio-Rad QX200 micro-droplet digital PCR instrument, automatic nucleic acid extraction system, micro-spectrophotometer, ultra-fast refrigerated centrifuge.

[0070] Reagents: 2×Droplet PCR Supermix, Droplet generation oil (purchased from Bio-Rad Biotechnology Co., Ltd.); primers and probes (same as Example 1).

[0071] 2. Preparation of DNA template

[0072] The beef DNA and pork DNA were formulated into DNA solutions with bovine contents of 50%, 10%, 5%, 1%, 0.1%, and 0.01% by volume, respectively, as templates for loading samples.

[0073] 3. Preparation of reaction system

[0074] The total volume of the PCR reaction system is 20 μL, and the components are as follows: 10 μL of 2×ddPCR Supermix mixed reaction solution, primers Bov-BGH-F, Bov-BGH-R, Sus-β-Actin-F, Sus-β-Actin-R 1 μL each, probe Bov-BGH-Pr, Sus-β-Actin-Pr each 1 μL, template DNA 2 μL, add ddH 2 O was added to ...

Embodiment 3

[0082] Detection of samples of beef balls sold in the market

[0083] 1. Instruments and reagents

[0084] Instruments: Bio-Rad QX200 micro-droplet digital PCR instrument, automatic nucleic acid extraction system, micro-spectrophotometer, ultra-fast refrigerated centrifuge.

[0085] Reagents: 2×Droplet PCR Supermix, Droplet generation oil (purchased from Bio-Rad Biotechnology Co., Ltd.); primers and probes (same as Example 1).

[0086] Test sample: a beef ball sample purchased from the market.

[0087] 2. DNA extraction and template preparation

[0088] About 200 g of the sample was taken, dried to a constant weight, and then ground into meat powder, and 2 g was weighed to extract genomic DNA using the modified CTAB magnetic bead method, and the obtained DNA solution was used as a sample loading template.

[0089] 3. Preparation of reaction system

[0090] The total volume of the PCR reaction system is 20 μL, and the components are as follows: 10 μL of 2×ddPCR Supermix mix...

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Abstract

The invention relates to the field of molecular biology and discloses a quantitative detection method of bovine-derived and porcine-derived components based on droplet digital PCR (polymerase chain reaction) as well as a primer and probe combination and a corresponding kit used by the method. The sequences of the primer and the probe are SEQ ID NO. 1-6. The method is applied to quantitative detection of bovine components in beef or beef products doped with pork; the defect that real-time fluorescence PCR quantitative detection needs to rely on a standard product is overcome; the method is capable of calculating the accurate content of one certain meat component by accurately measuring nucleic acid copy numbers of two meat components under the condition without any standard product or reference product; the method has extremely important practical significance for cracking down on counterfeit goods in the market and safeguarding the rights of consumers.

Description

technical field [0001] The present invention relates to the field of molecular biology, specifically a method for quantitatively detecting bovine and porcine-derived components using droplet digital PCR technology, as well as the combination of primers and probes used in the method, and the corresponding Reagent test kit. Background technique [0002] In recent years, the donkey-hide gelatin that has been exposed by the media does not contain donkey skin, fake beef, fake pig's trotters, duck meat made of mutton and skewers, American ginseng mixed with dried radish, cottage propolis, fake fish balls, fake bird's nest, The adulteration and sales of fake Cordyceps etc. involved bazaars, restaurants, and even well-known supermarkets and major e-commerce platforms that are deeply trusted by consumers. Faced with these food and health care products that are difficult to distinguish between true and false, consumers are always at a loss. How to identify whether these commodities ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6851C12Q1/6888C12Q2537/143C12Q2600/16C12Q2531/113C12Q2563/159C12Q2563/107
Inventor 黄永辉张卫东廖力徐淼锋迟远丽权永兵
Owner 珠海出入境检验检疫局检验检疫技术中心
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