Digital PCR-based protein active concentration determination method reference method

A concentration determination, protein technology, applied in the determination/inspection of microorganisms, biochemical equipment and methods, biological testing, etc., can solve problems such as inability to reflect protein activity and uncertainty

Inactive Publication Date: 2017-10-20
NAT INST OF METROLOGY CHINA
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  • Application Information

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Problems solved by technology

[0010] The above methods also need to use a chemical standard substance as a standard when performing protein quantification, and its value is not directly traceable to the SI unit; at the same time, the determination results of the protein content of the above determination methods are based on its primary sequence The prote

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  • Digital PCR-based protein active concentration determination method reference method
  • Digital PCR-based protein active concentration determination method reference method
  • Digital PCR-based protein active concentration determination method reference method

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Embodiment

[0054] A benchmark method for the determination of protein activity concentration based on digital PCR:

[0055] For the fatty acid binding protein FABP, purchase its polyclonal antibody from Abcam, use Nanodrop to quantify the concentration of the antibody, and dilute to 0.1mol / L sodium bicarbonate buffer (pH 8.0) or 0.5mol / L borate buffer (pH 8.6) 1mg / ml, the volume is 1-2.5ml;

[0056] Biotinylate the antibody as follows:

[0057] (1) Alternately use 0.1mol / L sodium bicarbonate buffer (pH 8.0) or 0.5mol / L borate buffer (pH 8.6) to fully dialyze the antibody;

[0058] (2) Dissolve 1 mg of NHSB with 1 ml of DMSO;

[0059] (3) Add 120 μl of NHSB solution (that is, contain 120 μg of NHSB) to 1 ml of antibody solution (that is, contain 1 mg of antibody);

[0060] (4) Stir continuously at room temperature and keep warm for 2 to 4 hours;

[0061] (5) Add 9.6μL 1mol / L NH 4 Cl (1 μl per 25 μg NHSB), stirred at room temperature for 10 minutes;

[0062] (6) Fully dialyze PBS at ...

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Abstract

The invention discloses a digital PCR-based protein active concentration determination method reference method. The method comprises the following steps: (1) preparing the antibody of a target protein to be tested; (2) labeling the obtained antibody with biotin; (3) synthesizing three fragments of single-strand oligonucleotides; (4) respectively labeling the 5'-end and the 3'-end of two of the three oligonucleotide segments with avidin; (5) designing a Taqman probe and a corresponding primer; (6) labeling antibodies with the oligonucleotides by using the amplification affinity reaction between the biotin and the avidin; (7) diluting the target protein to be tested with a buffer solution until the concentration is 5000 molecules/[mu]L or less, adding the above obtained two antibodies labeled with the oligonucleotides, the third oligonucleotide fragment and a DNA ligase to form an antigen-antibody compound, carrying out a digital PCR amplification reaction, and recording the obtained copy number as c0; (8) carrying out the digital PCR amplification reaction, and marking the obtained copy number as c1; and (9) calculating the concentration of the target protein to be tested according to a formula of c0 - c1.

Description

technical field [0001] The invention relates to the field of biochemical detection, in particular to a method for measuring protein activity concentration based on digital PCR. Background technique [0002] Metrology is an activity to achieve unit unity and accurate and reliable values. Research and establishment of high-accuracy measurement methods is one of the important contents of metrology research. A reference measurement method is a measurement method of the highest metrological quality, whose operation can be fully described and understood, whose final uncertainty can be expressed in SI units, and whose results are independent of the measurement standard being measured. The benchmark method is the basis for forming the source of the quantity value. [0003] With the development of life science and biotechnology, life science has experienced the development process from "descriptive biology" to "experimental biology" and then to "creative biology". Today's biology ha...

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Application Information

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IPC IPC(8): C12Q1/68G01N33/68G01N33/577G01N33/531
CPCC12Q1/686G01N33/531G01N33/577G01N33/68C12Q2563/159
Inventor 武利庆董莲华高运华王晶郑康乐盛灵慧金有训米薇杨彬王志栋
Owner NAT INST OF METROLOGY CHINA
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