HPK1-targeted gRNA and editing method of HPK1 gene
A targeting and gene technology, applied in the fields of molecular biology and immunology, can solve the problems of complex operation, enhanced killing activity of T cell hpk1 gene, and high technical requirements
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Embodiment 1
[0107] Design and synthesis of embodiment 1 gRNA
[0108] 1. Design of Guide RNA
[0109] The gRNA loading plasmid is pUC57kan-T7-gRNA, the gRNA targeting HPK1 is designed, and the gRNA targeting PD1 is used as a control. The sequence of the gRNA specifically targeting HPK1 and the genome is GACCTGGTGGCACTGAAGA (located in the second exon of HPK1, SEQ ID NO: 1); the sequence of the gRNA specifically targeting PD1 paired with the genome is GGCCAGGATGGTTCTTAGGT (located in the first exon of PD1 exon, SEQ ID NO: 2).
[0110] HPK1 gRNA: F:5'-TAGG GACCTGGTGGCACTGAAGA-3' (SEQ ID NO:3)
[0111] R: 5'-AAAC TCTTCAGTGCCACCAGGTC-3' (SEQ ID NO: 4).
[0112] PD1gRNA: F: 5'-TAGG GGCCAGGATGGTTCTTAGGT-3' (SEQ ID NO: 5)
[0113] R: 5'-AAAC ACCTAAGAACCATCCTGGCC-3' (SEQ ID NO: 6).
[0114] Synthesize the gRNA coding strand and complementary strand according to the above sequence, and insert the double-stranded DNA template formed by the annealing of the two DNA strands of HPK1gRNA and PD1gR...
Embodiment 2
[0117] Example 2 Recombinant expression and purification of Cas9 protein
[0118] The loading plasmid of Cas9 is PGEX4T-1, and the codon-optimized full-length human cas9cDNA is obtained by PCR. The template is the plasmid PUC19-T7-CAS9, and nuclear localization signals are added to the 5' and 3' ends of the Cas9 sequence (NLS) to promote the nuclear import of cas9 protein.
[0119] After the plasmid was constructed successfully, express the CAS9 protein with E.col, purify it through a GST column, concentrate and collect the protein, and cut off the GST tag with thrombin, an obvious single protein band can be seen around the 160kd band ( figure 2 ).
Embodiment 3
[0120] Example 3 In vitro expansion and transfection of human peripheral blood mononuclear cells
[0121] by using Extraction of human peripheral blood mononuclear cells by centrifugation and rapid separation of formazan sodium solution. CD3-positive peripheral blood mononuclear cells were sorted out with CD3 magnetic beads, and T cells were activated with CD3 / 28 antibody, with LONZA-X-VIVO 15 medium containing 100U / ml IL-2 at 37°C / 5% CO 2 The virus transfection and electroporation of the cells were carried out after culturing the cells under the condition of 2 days.
[0122] After cas9 protein and gRNA mRNA were mixed in proportion, they were left at room temperature for 10 minutes, while 4.0×10 6 CD3+ T cells (after CD3 / CD28 antibody activation in vitro for 48 hours) were transferred to a 15ml centrifuge tube, centrifuged at 500×g for 5 minutes, resuspended with 400ulopti-medium (containing cas9 and gRNA mixture), and transferred the cell mixture to the gap Place the ele...
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