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Application of alloprevotella in identifying and/or distinguishing individuals of different races

A technology of Pseudoprevotella and Prevotella, which is applied in the field of application of Pseudoprevotella in identifying and/or distinguishing individuals of different races, and can solve the problems of not disclosing the application of Pseudoprevotia

Active Publication Date: 2019-05-31
GENERAL HOSPITAL OF PLA
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] The prior art does not disclose the use of Pseudoprevotella in identifying and / or differentiating the ethnicity of a population

Method used

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  • Application of alloprevotella in identifying and/or distinguishing individuals of different races
  • Application of alloprevotella in identifying and/or distinguishing individuals of different races
  • Application of alloprevotella in identifying and/or distinguishing individuals of different races

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0063] Example 1 Using the relative abundance of Pseudoprevotella in individual feces to identify subjects as Tibetan or Han

[0064] (1) Determining the abundance of said microbial marker in said individual's stool sample:

[0065] 1) Collect the feces of the individual to be tested, and extract the DNA of the microorganisms in the feces:

[0066] Collect the feces of the individual to be tested, draw 1000ul of CTAB lysate into a 2.0ml EP tube, add lysozyme, add about 500ul of the sample into the lysate, put it in a water bath at 65°C, and mix it upside down several times during this period to fully lyse the sample. Take the supernatant by centrifugation, add phenol (pH8.0): chloroform: isoamyl alcohol (25:24:1), mix by inverting, and centrifuge at 12000rpm for 10min. Take the supernatant, add chloroform:isoamyl alcohol (24:1), mix by inverting, and centrifuge at 12000rpm for 10min. Pipette the supernatant into a 1.5mL centrifuge tube, add isopropanol, shake up and down, an...

Embodiment 2

[0079] Example 2 Feasibility of Using the Relative Abundance of Pseudoprevotella to Discriminate the Ethnicity of a Subject Identification Study Population:

[0080] The subjects were male soldiers serving in China. The experimental group consisted of 128 Tibetan male soldiers accustomed to plateaus above 3,500 meters above sea level. The control group consisted of 128 plain Han soldiers who were age-matched with Tibetan soldiers. Strictly control the two groups of people to have the same mixed diet of Chinese troops, maintain the same training environment and training intensity at an altitude of 3500 meters, quit smoking and drinking, and last for 3 months. Soldiers with chronic inflammatory diseases, oral antibiotics, acute infections, and gastrointestinal disorders were excluded.

[0081] method:

[0082] (1) Determining the abundance of said microbial marker in said individual's stool sample:

[0083] 1) Collect the feces of the individual to be tested, and extract the D...

Embodiment 3

[0098] Example 3 Constructing a ROC curve to compare and evaluate the ability of the relative abundance of bacteria to identify plateau Han population and Tibetan population

[0099] The receiver operating curve (ROC) method was used for verification, and the relative abundance of Pseudoprevotella in the feces of the subjects was used to judge its ability to identify the plateau Han population and the Tibetan population. Differences were compared using the Mann-Whitney test because the samples were not normally distributed. The ROC curve was drawn to evaluate the sensitivity and specificity of the relative abundance of the bacterial genera in the differential diagnosis of the plateau Han population and the Tibetan population, and the cut-off value was calculated. P<0.05 was considered statistically significant, and the SPSS22.0 software package was used for statistical processing.

[0100] Depend on figure 2 The results showed that the ROC curve showed that the relative abun...

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PUM

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Abstract

The invention relates to application of alloprevotella in identifying and / or distinguishing individuals of different races. The application of a microbial marker in identifying and / or distinguishing the individuals of different races is provided, and the microbial marker is alloprevotella.

Description

technical field [0001] The invention belongs to the field of biological identification and / or differentiation, and specifically relates to the application of Pseudoprevotella in identifying and / or differentiating individuals of different races. Background technique [0002] There are a large number of symbiotic flora in the human intestinal tract, the number of which exceeds 1000 trillion, which is about 10 times the total number of human cells. At the same time, the number of microbial genes in the intestinal tract is about 3 million, which is about 100 times the number of genes in the human genome. Such a large number of genes can help microorganisms adapt to the changing environment and form an inseparable symbiotic relationship with the human body. Residents with different genetic backgrounds and living habits have great differences in the composition of intestinal flora. For example, Bacteroides is the most abundant and inter-individual bacterial genus in the intestines...

Claims

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Application Information

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IPC IPC(8): C12Q1/6869C12Q1/06G16B40/00C12R1/01
Inventor 何昆仑冯强刘继轩赵乐兰翔赵晓静郝丽君陈卉宁史文杰
Owner GENERAL HOSPITAL OF PLA
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