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Alpha-thalassemia related gene detection kit

A thalassemia and kit technology, which is applied in the determination/examination of microorganisms, DNA/RNA fragments, recombinant DNA technology, etc., can solve the problems of missing α-globin fusion gene Fusiongene detection and wrong prenatal diagnosis results, etc. The effect of easy promotion, intuitive interpretation of results, and low cost

Active Publication Date: 2021-11-26
GUANGZHOU HYBRIBIO MEDICINE TECH LTD +2
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] In the traditional thalassemia screening process, if a person carries the fusion gene Fusion gene cannot be detected, if the person has the α 0 When a spouse with thalassemia gene gives birth to a child, the application of traditional detection kits may lead to wrong prenatal diagnosis results, resulting in the birth of children with HbH disease
[0008] At present, among the existing patented technologies of α-thalassemia detection products, only -- SEA 、-- THAI , -α 21.9 , -α 4.2 , -α 3.7 、α CS α, α QS α, α WS There is no direct detection of α globin fusion gene Fusiongene in the detection technology, method and kit of α, etc.

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0038] Example 1 Design and screening of primers for detection of α-globin fusion gene

[0039] Due to the high homology and high GC content among the α gene clusters, it is very difficult to amplify by ordinary PCR, and the expected product is often not obtained, and the specificity is poor, especially for the amplification of large fragments of repeat sequences with high GC content. difficulty. The reason may be that when such fragments are used as templates, the primers and templates tend to form stable secondary structures during annealing, hindering the progress of DNA polymerase on the templates, and there may be multiple non-specific primer local annealing sites on the templates. point, leading to non-specific amplification, and high GC-content repetitive sequence amplification further increases the generation of non-specific amplification.

[0040] In order to avoid the occurrence of the above situation, the present invention optimizes the PCR primers and PCR program ...

Embodiment 2

[0057] Example 2 PCR Amplification System for Detecting α-globin Fusion Gene

[0058] The clinical positive samples used in Example 1 were used as fusion gene positive samples, and the clinical negative samples used in Example 1 were used as negative samples.

[0059] Using primers Fusion gene-F (SEQ ID NO: 2) and Fusion gene-R (SEQ ID NO: 3), multiple sets of experiments were designed to determine the best PCR amplification system.

[0060] Set the final concentration of primers in the range of 0.1-1 μM, MgCl 2 The final concentration range is 1.0-5.0 mM, the final concentration range of dNTPs is 100-500 μM; the final concentration range of DNA polymerase is 0.5-4 U / reaction.

[0061] 1. Preliminary determination of primers, MgCl 2 , dNTPs, DNA polymerase final concentration on the amplification efficiency and specificity

[0062] 1. Effect of final primer concentration on amplification efficiency and specificity

[0063] (1) Experimental method

[0064] The amount of fi...

Embodiment 3

[0094] Example 3 Determination of PCR amplification conditions for detecting α-globin fusion gene

[0095] 1. Experimental method

[0096] Using a conventional PCR system, the reaction conditions were optimized in the following steps, as shown in Table 6:

[0097] Table 6 Optimization of PCR amplification conditions

[0098]

[0099] The same method was used to determine the PCR amplification conditions and the PCR amplification system. After preliminary experiments, the test factor levels were obtained as shown in Table 7.

[0100] Table 7 Test factors and levels

[0101]

[0102] On the basis of the above-mentioned preliminary experiments, denaturation time, annealing temperature, annealing time, and extension time were selected as the investigation factors, and a 3-level 4-factor experiment was carried out to comprehensively study the orthogonal effects of these four factors on the amplification efficiency and specificity. The impact of sex, so as to determine the ...

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Abstract

The invention discloses an alpha-thalassemia related gene detection kit. The invention provides an alpha-thalassemia detection primer group for detecting alpha globin fusion gene, particularly primers with nucleotide sequences as shown in SEQ ID NO: 2-3, and a detection kit constructed based on the alpha-thalassemia detection primer group; and the operation is simple, the cost is low, the specificity is high, the result interpretation is visual, the popularization is easy, and the alpha-thalassemia detection primer group is suitable for being used in various occasions. Moreover, the primer group also has a very good multi-system general advantage, and can be matched with other detection primers for multiple PCR detection, for example, primers with nucleotide sequences as shown in SEQ ID NO: 4-5 or primers with nucleotide sequences as shown in SEQ ID NO: 6-7 can be used for detecting various types of alpha-thalassemia at one time. The technical scheme provided by the invention is of great significance to screening, genetic counseling and prenatal diagnosis of crowds suffering from thalassemia.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a detection kit for α-thalassemia-related genes. Background technique [0002] Thalassemia is an autosomal recessive genetic hemolytic disease caused by a defect in the globin gene, resulting in reduced or missing globin chain synthesis, resulting in an imbalance in the α-chain / non-α-chain ratio that forms hemoglobin. There may be no clinical manifestations, and severe cases are characterized by hemolytic anemia. According to the type of inhibition of globin peptide chain synthesis, thalassemia can be divided into α-thalassemia, β-thalassemia, δ-thalassemia, γ-thalassemia, δβ-thalassemia and εγδβ-thalassemia and so on. In addition, clinically, the disease is divided into three types: mild (thalassemia gene carrier), intermediate and severe. [0003] The α-globin gene is located in the α-globin gene cluster at the end of the short arm of human chromosome 16, which includes two repea...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6883C12Q1/6858C12N15/11
CPCC12Q1/6883C12Q1/6858C12Q2600/156C12Q2600/16C12Q2531/113C12Q2537/143C12Q2565/125
Inventor 马晓敏葛毅媛苏秀怡蒙燕娟谢俊
Owner GUANGZHOU HYBRIBIO MEDICINE TECH LTD
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