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Detection method and application of extracellular vesicles and subtypes thereof in separation-free system

A system and detection probe technology, applied in biochemical equipment and methods, microbial determination/inspection, material excitation analysis, etc., can solve the problem of low sensitivity and achieve wide application prospects, simple operation, and high specificity.

Pending Publication Date: 2022-07-29
INST OF CHEM CHINESE ACAD OF SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, due to the complexity of body fluids, there are few non-separation methods that can be used for clinical body fluid samples, or the sensitivity is not high, or it is necessary to rely on expensive instruments such as digital PCR to obtain satisfactory sensitivity.

Method used

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  • Detection method and application of extracellular vesicles and subtypes thereof in separation-free system
  • Detection method and application of extracellular vesicles and subtypes thereof in separation-free system
  • Detection method and application of extracellular vesicles and subtypes thereof in separation-free system

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0084] Example 1 Preparation of cell line extracellular vesicle standard solution

[0085] (1) Extraction of extracellular vesicles from cell lines

[0086] The cell culture medium was centrifuged at 3000g at room temperature to remove cells and large debris to obtain a supernatant; the obtained supernatant was centrifuged at 100,000g for 120 minutes, the supernatant was discarded to get the precipitate, and the PBS buffer with pH 7.4 was used. The pellet was resuspended, centrifuged again at 100,000g for 120 minutes, and the supernatant was discarded to collect the pellet. The pellet was resuspended in 100 μL of PBS buffer pH 7.4 to obtain cell line extracellular vesicles. The concentration of extracellular vesicles of the obtained cell line was measured by nanoflow, and then stored in aliquots at -80°C for the subsequent construction of a standard curve.

[0087] (2) Preparation of EVs-free plasma

[0088] Normal human plasma samples were centrifuged at 100,000 g overnigh...

Embodiment 2

[0091] Example 2 Construction of working curve of total EVs in tumor cell MCF7 detected by fluorescence polarization method

[0092] The EVs obtained in Example 1 were subjected to fluorescence polarization detection (principle such as figure 1 A). Will I biotin-Chol , II Fam-F , III Chol-C Three strands were mixed in the sample diluent at 1:1:1 to obtain a reaction solution with a final concentration of 2nM. Mix 50 μL of the reaction solution with 50 μL of standard solutions of MCF7 cell line EVs with different concentrations (the final concentration of EVs is 1.25×10). 2 pcs / μL, 1.25×10 3 pcs / μL, 1.25×10 4 pcs / μL, 1.25×10 5 pcs / μL, 1.25×10 6 pcs / μL, 1.25×10 7 1 / μL), react in the dark for 50 minutes at room temperature, then add 1 μL of 1 mg / mL streptavidin, and react in the dark for 10 minutes at room temperature. After the reaction, the reaction solution was added to a black microplate, and the fluorescence polarization value was measured with a multi-function mic...

Embodiment 3

[0094] Example 3 Construction of a working curve for detecting EVs expressing a specific protein in tumor cells MCF7 by fluorescence polarization

[0095] Ⅰ biotin-AptCD63 The sequence is: 5'-Biotin-GGAGTGATCTCAGTGAC(T) 20 CACCCCACCTCGCTCCCGTGACACTAATGCTA-3'.

[0096] The EVs obtained in Example 1 were subjected to fluorescence polarization detection (principle such as figure 1 B). Will I biotin-AptCD63 , II Fam-F , III Chol-C Three strands were mixed in the sample diluent at 1:1:1 to obtain a reaction solution with a final concentration of 2nM. Mix 50 μL of the reaction solution with 50 μL of different concentrations of MCF7 cell line EVs standard solution (the final concentration of EVs is 12.5 / μL, 1.25×10 2 pcs / μL, 1.25×10 3 pcs / μL, 1.25×10 4 pcs / μL, 1.25×10 5 pcs / μL, 1.25×10 6 pcs / μL, 1.25×10 7 1 / μL), react in the dark for 50 minutes at room temperature, then add 1 μL of 1 mg / mL streptavidin, and react in the dark for 10 minutes at room temperature. After the ...

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Abstract

The invention relates to a detection method and application of extracellular vesicles and subtypes thereof in a separation-free system, and provides a detection probe which comprises a probe I, a probe II and a probe III, one end of the probe I is marked with biotin, and the other end of the probe I is marked with a first recognition unit; one end of the probe II is marked with a fluorescent dye; one end of the probe III is marked with a second identification unit; the probe I and the probe II are partially paired, so that the biotin and the fluorescent dye are close to each other; the probe I and the probe II are respectively and partially paired with the probe III, so that the probe I, the probe II and the probe III are hybridized to form a T-shaped structure under the condition that a detection target exists through a combined standing effect. The invention further provides a corresponding detection method, the extracellular vesicles can be detected in a non-separation system, and the method has the advantages of being easy to operate, rapid in detection, high in sensitivity, not prone to being influenced by fluorescence intensity fluctuation and fluorescence bleaching and the like.

Description

technical field [0001] The invention relates to the technical field of analysis and detection of extracellular vesicles, in particular to a detection method and application of extracellular vesicles and their subtypes in a separation-free system. Background technique [0002] Extracellular vesicles (EVs) are a class of extracellular vesicles with lipid bilayer membrane structure that can be secreted by most living cells. They contain cell-specific proteins, lipids and nucleic acids, which can be used as signaling molecules. passed to other cells to affect the function of other cells. Among the extracellular vesicles, exosomes with smaller size have been studied more. Studies have found that extracellular vesicles can dynamically reflect tumor progression in real time. The specific biomarkers of tumor EVs (such as proteins, lipids and nucleic acids) have the characteristics of tumor cells, and EVs produced in different organs can be used as molecular markers for tumor diagn...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/682C12Q1/04G01N21/64C12N15/11
CPCC12Q1/682G01N21/6445C12Q2563/107C12Q2525/205
Inventor 方晓红张振刘维凤徐丽
Owner INST OF CHEM CHINESE ACAD OF SCI