Endogenous auto-fluorescent biological markers for assessing a biological parameter of a cell
a cell and autofluorescence technology, applied in the field of endogenous autofluorescent biological markers for assessing the biological parameter of a cell, can solve the problems of inability to perform real-time optimization, difficult to quantify the parameters of a cell culture, and generally long and costly methods
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example i
Determination of Endogenous Biological Markers
[0072]Calibration of the spectrophotometer. For each marker tested, a 500 μM aqueous solution was prepared with pure chemicals. Each sample of candidate marker was scanned in 3D (λexcitation, λemission, Relative Fluorescent Unit or RFU) using a Saphire2 (Tecan) spectrophotometer with excitation and emission wavelengths starting from 50 nm under the theoretical wavelengths of the candidate marker (i.e. excitation and emission wavelengths associated to the peak from the literature) to 50 nm over the theoretical wavelengths. If the reading of the signal is over, the reading gain was adjusted or the original solution was diluted until a clear signal was obtained. This enabled the identification of the excitation and emission wavelength corresponding to the maximal amplitude reading for each peak of the candidate marker.
[0073]Optical imprint of the biological marker. The solutions of the markers tested were also scanned in 3D (λexcitation, λe...
example ii
Corrolation of the Endogenous Auto-Fluorescent Biological Marker with Various Biological Parameters
[0080]Biomass concentration. Three fluorescent signals associated with specific biological markers have been identified as being representative of the biomass concentration: tryptamine (λexcitation 230, λemission 352), FAD (λexcitation 431, λemission 535) and riboflavin and FAD (λexcitation 452, λemission 532). As shown in FIG. 1, the three markers can be used to estimate accurately the biomass concentration. They can also be used to estimate the biomass concentration as a function of time. Further, all three markers correlate with a growth phase of the cell culture.
[0081]Cellular concentration. Four fluorescent signals associated with specific biological markers have been identified as being representative of the cellular concentration: FAD from the suspension (λexcitation 368, λemission 526), riboflavin from the suspension (λexcitation 368, λemission 532), FAD from the filtrate (λex...
example iii
Use of the Endogenous Biological Markers in Other Biological Systems
[0084]Arabidopsis thaliana. In order to prepare the MS medium, 500 mL water was poured in a graduated cylinder and stirred. Then, sequentially, 6.45 g of MS salts, 0.885 g of MES, 45 g of sucrose, 1.5 mL of B5 vitamins, 0.3 mL of 2,4-D solution (4.4 mM) were added to the stirring water. The volume of the solution was adjusted to 1 L with water and the solution was stirred to obtain the dissolution of the chemicals. The pH of the solution was the adjusted to 5.7 using a 1M KOH solution. The solution was then sterilized (autoclaved 15 min, 121° C. and 15 psig) for use in the cell culture. Every 7 days, a 15 mL of a two-week old cell culture was added to 30 mL of fresh medium. The cells were cultured for 7 days under constant agitation (120 RPM) at 25° C. Aliquots were taken at various intervals. Fluorescent readings were performed on the cell suspensions only. The determination of fluorescence as well as the determina...
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