A new target for inhibiting metastasis of bladder cancer and its application
A technology for bladder cancer and bladder cancer cells, applied in the field of new targets for inhibiting bladder cancer metastasis, can solve the problems of unclear molecular mechanism of bladder cancer metastasis, and achieve the effect of preventing or/and treating bladder cancer metastasis
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experiment Embodiment 1
[0023] Bioinformatics analysis of miR-3648 in TCGA database was up-regulated in bladder cancer patients.
[0024] 1) Bioinformatics Download and analyze the level 3 data of RNA-seq V2 and miRNA-seq in the TCGA database.
[0025] 2) Collect the barcode information of the samples, select Primary solid Tumor (sampe ID ends with -01) and Solid Tissue Normal (samples ID ends with 11) samples for analysis, a total of 19 pairs and 38 samples. The R package edgeR was used to analyze the differential expression of miRNAs in paired samples of cancer (tumor) and para-cancer (normal), which adopted a weighted trimmed mean of M values (TMM) normalization method of the logarithmic expression ratio . In order to reduce false positives (false discovery rate, fdr), p-value was corrected by Benjamini–Hochberg (BH) method. The screening threshold for the significance of the difference was log2fold-change (logFC) not less than 3, fdrfigure 1 As shown, among the 19 patients, the expression lev...
experiment Embodiment 2
[0027] Expression of miR-3648 in clinical bladder cancer samples and human bladder cancer cells
[0028] 1) Tissue samples
[0029] Tissue samples from 33 patients who underwent bladder cancer surgery in the Department of Urology, The First Affiliated Hospital of Wenzhou Medical University between March 2014 and December 2016 were collected. Collect patient name, gender, age, pathology number, pathology and other information. Most of the selected patients were male and all underwent total cystectomy. Preoperative biopsy and postoperative pathological examination confirmed bladder urothelial carcinoma. Tumor tissue was collected from each sample, and normal tissue was cut about 3cm away from the tumor as a control. Each sample was frozen in liquid nitrogen after tissue isolation. The experimental operation was approved by ethical review.
[0030] 2) Tissue / cell total RNA extraction
[0031] a. Take out the bladder cancer clinical samples from the -80°C refrigerator, put ab...
experiment Embodiment 3
[0071] Inhibition of miR-3648 expression significantly reduces the invasive ability of bladder cancer cells
[0072] 1) T24T and UMUC3 cells were selected as the research object. LV3-pGLV-h1-GFP-puro-miR-3648-inhibitor-sponge plasmid was used to inhibit miR-3648 in T24T and UMUC3 cells, and stable transfection cells T24T (miR- 3648-inhibitor), UMUC3 (miR-3648-inhibitor) and its control T24T-Vector, UMUC3-Vector, using U6 as an internal reference, using 2-△△ct to calculate the gene expression of miR-3648 in stably transfected cells fold change. The result is as image 3 A, 3B show that a stable transfection cell line inhibited by miR-3648 was successfully constructed, and the difference was statistically significant.
[0073] 2) Using Transwell experiment, T24T (miR-3648-inhibitor), UMUC3 (miR-3648-inhibitor) and control cells were resuspended with 0.1% corresponding medium and planted in the upper chamber, and the lower chamber was cultured in full culture After 24 hours, f...
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