LAMP primer combination for detecting 6 infectious pathogens of dairy cow mastitis and application thereof
A primer combination and primer set technology, applied in recombinant DNA technology, microbial measurement/testing, biochemical equipment and methods, etc., can solve problems such as time-consuming, poor specificity, and low throughput
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Embodiment 1
[0187] Embodiment 1, the preparation of kit
[0188] The kit consists of six LAMP primer sets, each for the detection of one infectious agent of cow mastitis.
[0189] The primer set for detecting Mycoplasma bovis is as follows (5'→3'):
[0190] Outer primer F3 (SEQ ID NO: 1): GGACGACGTCAAATCATCA;
[0191] Outer primer B3 (SEQ ID NO: 2): CCGTAGCGTAGCTGATCT;
[0192] Internal primer FIP (SEQ ID NO: 3): CCATGTCACCACTTCGCTTTCTCTTCCTCTTACGAGTGGGGCTA;
[0193] Internal primer BIP (SEQ ID NO: 4): CAAACCTCAAAAAACCGTTCTCAGACGATTACTAGCGATTCCGACT;
[0194] Loop primer LF (SEQ ID NO: 5): ACCGTCCATTGTAGCACGTGTG;
[0195] Loop primer LB (SEQ ID NO: 6): AAGTCTGCAACTCGACTTCATG.
[0196] The primer set used to detect Staphylococcus aureus is as follows (5'→3'):
[0197] Outer primer F3 (SEQ ID NO: 7): GCAACTGAAACAACAGAAGC;
[0198] Outer primer B3 (SEQ ID NO: 8): TTTTGTGTTGGGCGAGC;
[0199] Internal primer FIP (SEQ ID NO: 9): TCACGGATACCTGTACCAGCATCTCTATGGTCCGAGACCGCAATT;
[0200] In...
Embodiment 2
[0232] Embodiment 2, specificity
[0233] Test sample 1: Mycoplasma bovis ( 25523 TM ).
[0234] Test sample 2: Staphylococcus aureus (CVCC 545).
[0235] Test sample 3: Streptococcus agalactiae (CVCC 586).
[0236] Test sample 4: Streptococcus pyogenes (CGMCC1.8868).
[0237] Test sample 5: Corynebacterium bovis (CVCC CAU0107).
[0238] Test sample 6: Staphylococcus epidermidis ( 12228 TM ).
[0239] Each sample to be tested carries out the following steps respectively:
[0240] 1. Extract the genomic DNA of the sample to be tested.
[0241] 2. Using the genomic DNA extracted in step 1 as a template, each primer set prepared in Example 1 was used to perform loop-mediated isothermal amplification.
[0242] Reaction system (10 μL): 7.0 μL reaction solution (product of Boao Bio Group Co., Ltd., catalog number CP.440020), 1 μL primer mixture, 1 μL template DNA (5pg-50pg), make up to 10 μL with water. The primer mixture is the mixture of each primer in the primer set....
Embodiment 3
[0252] Embodiment 3, sensitivity
[0253] Test sample 1: Mycoplasma bovis ( 25523 TM ).
[0254] Test sample 2: Staphylococcus aureus (CVCC 545).
[0255] Test sample 3: Streptococcus agalactiae (CVCC 586).
[0256] Test sample 4: Streptococcus pyogenes (CGMCC1.8868).
[0257] Test sample 5: Corynebacterium bovis (CVCC CAU0107).
[0258] Test sample 6: Staphylococcus epidermidis ( 12228 TM ).
[0259] 1. Extract the genomic DNA of the sample to be tested, and perform gradient dilution with sterile water to obtain each dilution.
[0260] 2. Using the dilution obtained in step 1 as a template, the primer sets prepared in Example 1 were used to perform loop-mediated isothermal amplification.
[0261] When the sample to be tested is the sample to be tested 1, the loop-mediated isothermal amplification is performed using primer set I. When the sample to be tested is the sample to be tested 2, loop-mediated isothermal amplification is performed using primer set II. When...
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