Use of methylation level of gene in auxiliary diagnosis of cancers
An auxiliary diagnosis and methylation technology, applied in the medical field, can solve the problems of long inspection time, susceptibility to liver function and cholestasis, low sensitivity of early patients, etc., and achieve the effect of reducing the effect of diagnosis and treatment
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Embodiment 1
[0199] Example 1. Primer Design for Detection of MGRN1 Gene Methylation Sites
[0200] After extensive sequence and functional analysis, eight fragments (MGRN1_A fragment, MGRN1_B fragment, MGRN1_C fragment, MGRN1_D fragment, MGRN1_E fragment, MGRN1_F fragment, MGRN1_G fragment, MGRN1_H fragment) in the MGRN1 gene were selected for methylation level and cancer correlation analyze.
[0201] The MGRN1_A fragment (SEQ ID No.1) is located at chr16:4673604-4674476 of the hg19 reference genome, the sense strand.
[0202] MGRN1_B fragment (SEQ ID No.2) is located at hg19 reference genome chr16:4699588-4700441, antisense strand.
[0203] The MGRN1_C fragment (SEQ ID No.3) is located at chr16:4713936-4714859 of the hg19 reference genome, the sense strand.
[0204] The MGRN1_D fragment (SEQ ID No.4) is located at chr16:4729664-4731004 of the hg19 reference genome, the antisense strand.
[0205] MGRN1_E fragment (SEQ ID No.5) is located at hg19 reference genome chr16:4730980-4732117, ...
Embodiment 2
[0241] Example 2, MGRN1 gene methylation detection and result analysis
[0242] 1. Research samples
[0243] With the informed consent of the patients, a total of 722 patients with lung cancer, 152 patients with benign nodules in the lungs, 79 patients with pancreatic cancer, 118 patients with esophageal cancer and 945 cancer-free controls were collected. Ex vivo blood samples from patients with cancer and no pulmonary nodules reported and blood routine indicators are within the reference range).
[0244] All patient samples were collected preoperatively and confirmed radiographically and pathologically.
[0245] Lung, pancreatic, and esophageal cancer subtypes were judged based on histopathology.
[0246] Lung cancer staging is based on the AJCC 8th edition staging system.
[0247] The 722 cases of lung cancer patients were divided according to the type: 619 cases of lung adenocarcinoma, 42 cases of lung squamous cell carcinoma, 49 cases of small cell lung cancer, and 12 c...
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