Methylation marker for auxiliary diagnosis of cancers
An auxiliary diagnosis and methylation technology, applied in the medical field, can solve the problems of long inspection time, large human body radiation, and low correlation, and achieve the effect of reducing the effect of diagnosis and treatment
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Embodiment 1
[0138] Example 1. Primer Design for Detection of DYRK4 Gene Methylation Sites
[0139] After extensive sequence and functional analysis, two fragments (DYRK4_A fragment and DYRK4_B fragment) in the DYRK4 gene were selected for methylation level and cancer correlation analysis.
[0140] The DYRK4_A fragment is located in hg19 reference genome chr12:4698561-4699683, antisense strand.
[0141] The DYRK4_B fragment is located in hg19 reference genome chr12:4699662-4700452, antisense strand.
[0142] The CpG site information in the DYRK4_A fragment (SEQ ID No.1) is shown in Table 1.
[0143] The CpG site information in the DYRK4_B fragment (SEQ ID No.2) is shown in Table 2.
[0144] Table 1 CpG site information in DYRK4_A fragment
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[0147] Table 2 CpG site information in DYRK4_B fragment
[0148] CpG site The position of the CpG site in the sequence DYRK4_B_1 SEQ ID No.2 from 5' end 101-102 DYRK4_B_2 SEQ ID No.2 from 5' end 256-...
Embodiment 2
[0152] Example 2, DYRK4 gene methylation detection and result analysis
[0153] 1. Research samples
[0154] With the informed consent of the patients, a total of 722 patients with lung cancer, 152 patients with benign nodules in the lungs, 79 patients with pancreatic cancer, 118 patients with esophageal cancer and 945 cancer-free controls were collected. Cancer, and there is no report of benign nodules in the lungs and blood routine indicators are within the reference range).
[0155] All patient samples were collected preoperatively and confirmed radiographically and pathologically.
[0156] Lung, pancreatic, and esophageal cancer subtypes were judged based on histopathology.
[0157] Lung cancer staging is based on the AJCC 8th edition staging system.
[0158] The 722 cases of lung cancer patients were divided according to the type: 619 cases of lung adenocarcinoma, 42 cases of lung squamous cell carcinoma, 49 cases of small cell lung cancer, and 12 cases of others.
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