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Construction method and application of glycine ribose switch gene regulation circuit

A technology of riboswitch and construction method, applied in the field of synthetic biology, can solve the problem of narrow sensing range and so on

Pending Publication Date: 2022-03-29
TIANJIN UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the natural glycine riboswitch is very sensitive to glycine, and the narrow sensing range is still an urgent problem to be solved.

Method used

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  • Construction method and application of glycine ribose switch gene regulation circuit
  • Construction method and application of glycine ribose switch gene regulation circuit
  • Construction method and application of glycine ribose switch gene regulation circuit

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0052] A method for constructing a gene regulatory circuit of a glycine riboswitch and screening for mutants, which is characterized by comprising the following steps:

[0053] 1): Using BSGlyRS-F shown in SEQ ID No.1 and BSGlyRS-R shown in SEQ ID No.2 as primers, and using pUC-BSGlyRS shown in SEQ ID No.3 as a template, by PCR method, get SEQ ID NO. BSGlyRS fragment shown in ID No.4;

[0054] 2): Using tetA-F shown in SEQ ID No.5 and tetA-R shown in SEQ ID No.6 as primers, pUC-TETA shown in SEQ ID No.7 as a template, by PCR method, get SEQ ID No. The tetA fragment shown in ID No.8;

[0055] 3): Using GFP-F shown in SEQ ID No.9 and GFP-R shown in SEQ ID No.10 as primers, using pUC-GFP shown in SEQ ID No.11 as template, by PCR method, get SEQ ID No. GFP fragment shown in ID No.12;

[0056]4): using pUC18-F shown in SEQ ID No.13 and pUC18-R shown in SEQ ID No.14 as primers, and pUC18 shown in SEQ ID No.15 as a template, amplified by PCR to obtain the pUC18 plasmid backbone; ...

Embodiment 2

[0078] The fermentation characterization method of the glycine riboswitch gene circuit, as follows:

[0079] (1) Activated strains: the strain MG1655-BSTG with wild-type glycine element, the strain MG1655-BS-ON14 with BSglyON14, and the strain MG1655-BS-OFF6 with BSglyOFF6 were cultured on LB solid containing ampicillin resistance Streak in the base, culture at 37°C for 10-20h to rejuvenate the strain;

[0080] (2) Cultivation of the seed liquid: the activated bacteria in step (1) of Tiaoyihuan were inoculated into the LB liquid medium, cultivated at 37°C and 220rpm for 10-20h, and then the resulting bacterial liquid was prepared according to the initial OD 600 =0.02 inoculum amount was inoculated into M9 medium, cultured at 37°C and 220rpm for 10-20h to obtain seed solution;

[0081] (3) Fermentation characterization: the seed liquid obtained in step (2) was 600 =0.02 was inoculated into a 50mL Erlenmeyer flask, and ampicillin was added to make the concentration 80-100μg / L....

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PUM

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Abstract

The invention relates to a construction method and application of a glycine ribose switch gene regulation circuit. The glycine-ON mutants with improved performance, increased glycine response range and increased amplitude value and the glycine ribose switch mutants with changed conformations are screened from a library in a high-throughput manner by mutating on a wild type glycine ribose switch element sequence, so that gene expression regulation and control can be realized. According to the invention, wild type glycine-ON is converted into a glycine-OFF riboswitch, and the amplitude value of the riboswitch is increased. The invention also provides a method for screening glycine mutants with improved performance and changed conformations, and expression vectors and host cells containing the mutants. The construction, performance improvement and conformation change mutant of the glycine ribose switch gene regulation circuit is an effective mutant based on the glycine ribose switch circuit and performance improvement reported for the first time in escherichia coli at present.

Description

technical field [0001] The invention belongs to the field of synthetic biology, and in particular relates to a method for constructing a gene regulation circuit, screening and application of glycine riboswitch mutants. Background technique [0002] Metabolic engineering is an important method for the biosynthesis of chemicals and biomaterials. However, traditional metabolic engineering methods usually achieve the production of target products by simply overexpressing or knocking out pathway genes, which inevitably leads to problems such as affected cell growth, metabolic imbalance, and insufficient utilization of resources. In contrast, natural cells can effectively balance the balance between cell growth and intracellular metabolites, so as to achieve the best results between cell growth, product production and efficient use of energy. [0003] In order to solve the above problems, some combinatorial libraries of promoters, RBS and intergenic regions are widely designed to...

Claims

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Application Information

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IPC IPC(8): C12N15/70C12N15/31C12N15/65C12N15/10C12N1/21C12R1/19
CPCC07K14/32C12N15/70C12N15/65C12N15/1093
Inventor 王智文洪坤强张静晋彪陈涛
Owner TIANJIN UNIV